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Where can I use the VSN source code in C++?
vsn r language C++ source code
updated 4.9 years ago by ▴ 660 • written 4.9 years ago by • 0
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Bioc components are failing to build with iconv error"unsupported conversion from 'latin1' to 'ASCII'"
r language
updated 5.2 years ago by 58k • written 5.2 years ago by • 0
2
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5
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heatmap in R
r language microarray geneexpression
updated 6.4 years ago by ▴ 980 • written 6.4 years ago by • 0
3 results • Page 1 of 1
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Answer: airway package not compatible with R version 4.1.2 (2021-11-01) by ATpoint ▴ 970
`data(airway)` is your friend. The CRAN error comes from the fact that it is not a CRAN package, not that it is a version problem itself.
Comment: airway package not compatible with R version 4.1.2 (2021-11-01) by Lluís Revilla Sancho ▴ 660
I think it would help if you try again to install it via `BiocManager::install("airway")` and report the exact text output (without quittin…
Comment: Housekeeping genes vary across contrast groups, using DESeq2 on NanoString data by Michael Love 35k
This looks as expected with the control genes centered on the x-axis (yes, these can have high variance, this is discussed in work by Risso…
Comment: Housekeeping genes vary across contrast groups, using DESeq2 on NanoString data by argonvibio • 0
Hello Michael, and thank you for your reply. I have done as you described, estimating size factors with controlGenes before DESeq, but the…
Answer: DiffBind issue: zero values for all peaks in one chromosome by Rory Stark ★ 4.3k
Losing the reads for one tissue on one chromosome doesn't sound too good! I notice that you are using `DiffBind_3.0`, which is out of da…
Votes
Emirical Bayesian shrinkage for dispertion/LFC estimation
C: Emirical Bayesian shrinkage for dispertion/LFC estimation
A: Emirical Bayesian shrinkage for dispertion/LFC estimation
Comment: airway package not compatible with R version 4.1.2 (2021-11-01)
Comment: universalmotif, question about enrich_motifs function and number of hits returne
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