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rDGIdb
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0
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470
views
queryDGIdb lexical error for some genes
lexicalerror
rDGIdb
DGIdb
json
19 months ago
Dennis
• 0
0
votes
6
replies
1.0k
views
rDGIdb package inconsistency with web interface
rDGIdb
23 months ago
christopherjamessteel1990
• 0
0
votes
0
replies
861
views
rDGIdb package: score of the results
rDGIdb
r
2.7 years ago
HELEN
• 0
0
votes
0
replies
770
views
Timeout error when querying DGIDB
rDGIdb
3.4 years ago
Jannah
• 0
0
votes
0
replies
702
views
DGIdb service not available
rDGIdb
3.8 years ago
DannyM
• 0
0
votes
0
replies
890
views
Is there currently something wrong with the rDGIdb API?
rDGIdb
5.0 years ago
mike-zx
• 0
0
votes
1
reply
1.4k
views
What happends with a package in submission through the old issue tracker?
github
package submission
rDGIdb
issue tracker
updated 9.4 years ago by
Martin Morgan
25k • written 9.4 years ago by
Thomas Thurnherr
• 0
7 results • Page
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Answer: Add additional maintainer for MOFA2
by
shepherl
4.2k
These requests are best on the bioc-devel @ r-project.org or a request to maintainer @ bioconductor.org -- We would ideally need the curre…
Answer: After running samtools, the featureCounts command crashed.
by
Kevin Blighe
★ 4.0k
Hi Rui Tang, The "buffer overflow detected" error in featureCounts usually stems from a corrupted or malformed GTF file, often due to tr…
Answer: Problem with the TMB plot
by
Kevin Blighe
★ 4.0k
Hi, The linear TMB plot with no clustering suggests your variant calls may lack sample-specific discrimination, likely due to filtering ap…
Answer: gene Set with high AUC score but no cells assigned to cell type
by
Kevin Blighe
★ 4.0k
Hi, You have correctly identified the issue: AUCell's automatic threshold selection is conservative by design, aiming for specificity to…
Answer: featureCounts -L: high unassigned:mapq fraction
by
Kevin Blighe
★ 4.0k
Hi Katarzyna, The discrepancy arises because your samtools stats were restricted to genic regions only, where alignments are typically o…
Votes
Using edgeR or DESeq2 to analyze allele-specific expression?
Answer: DESeq2 design for haplotype MPRA
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Suppress warning in RHDF5 write
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