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rDGIdb
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79
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queryDGIdb lexical error for some genes
lexicalerror
rDGIdb
DGIdb
json
16 days ago
Dennis
• 0
0
votes
6
replies
435
views
rDGIdb package inconsistency with web interface
rDGIdb
4 months ago
christopherjamessteel1990
• 0
0
votes
0
replies
464
views
rDGIdb package: score of the results
rDGIdb
r
13 months ago
HELEN
• 0
0
votes
0
replies
508
views
Timeout error when querying DGIDB
rDGIdb
22 months ago
Jannah
• 0
0
votes
0
replies
448
views
DGIdb service not available
rDGIdb
2.2 years ago
DannyM
• 0
0
votes
0
replies
607
views
Is there currently something wrong with the rDGIdb API?
rDGIdb
3.4 years ago
mike-zx
• 0
0
votes
1
reply
1.0k
views
What happends with a package in submission through the old issue tracker?
github
package submission
rDGIdb
issue tracker
updated 7.8 years ago by
Martin Morgan
25k • written 7.8 years ago by
Thomas Thurnherr
• 0
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Answer: Dominance Index for Shotgun Metagenomics Data
by
Leo Lahti
▴ 40
1. Note that Simpson's dominance index (\lambda) is a different index than inverse Simpson (1/\lambda) or reciprocal Simpson (1-\lambda). T…
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
pl23
• 0
Thank you very much - that worked perfectly! Word of warning to those who try this: it screws up the other legends because of the markdown …
Answer: PCA plot suggestions
by
Michael Love
41k
For help with interpretation and design of analysis, I recommend working with a local statistician. Due to time restrictions, I can only…
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
by
ussarizona
▴ 10
Hi Michael, Yes, I could figure it out what does the error mean. In my matrix I had the first colum GeneID while in my condition I only h…
Answer: Deseq2. decontXcounts not integers. Useful alternative?
by
Michael Love
41k
Another option would be to put the per sample estimated contamination in the design. This is for example how RUV etc help remove spurious D…
Votes
Answer: Dominance Index for Shotgun Metagenomics Data
Answer: Math expression in shapeCustom legend in EnhancedVolcano
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
Comment: Deseq2. decontXcounts not integers. Useful alternative?
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
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