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Gordon Smyth
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Comment: Methods for removing unexpressed probes of Affymetrix Human Genome U219 Array
by
Yang Shi
•
0
Thanks sir! I got it now!
Comment: Reading multiple data segments from FCS 3.0 file
by
SamGG
▴
270
You should better start a question, but here is some clues.
While this operation is refered as concatenate you can find it as coerce in flo…
Answer: how to make a group to apply the data to CAMERA
by
Gordon Smyth
45k
See the [limma User's Guide](https://www.bioconductor.org/packages/3.15/bioc/vignettes/limma/inst/doc/usersguide.pdf) for how to undertake …
Answer: Methods for removing unexpressed probes of Affymetrix Human Genome U219 Array
by
Guido Hooiveld
★
3.2k
To add to the extensive discussion above, you may also want to have a look at the so-called UPC algorithm, available in the [package][1] `S…
Answer: How to best visualize multi-level transcriptomics experiment data?
by
Gordon Smyth
45k
> One way is to extract the differentially expressed genes with p.val = 0.05 and logFC = +/-1.0
I strongly recommend using FDR < 0.05 and…
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