Bioconductor Readqpcr

Showing : readqpcr • reset

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594

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ReadqPCR phenoData object

5.5 years ago jchoza • 0

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ddCt HTqPCR ReadqPCR ddCt HTqPCR ReadqPCR

10.6 years ago Guest User ★ 13k

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3.3k

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ReadqPCR NormqPCR ReadqPCR NormqPCR

updated 11.8 years ago by James Perkins ▴ 120 • written 11.8 years ago by Guest User ★ 13k

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convert qpcrNorm ddCt HTqPCR ReadqPCR convert qpcrNorm ddCt HTqPCR ReadqPCR

11.8 years ago Guest User ★ 13k

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qPCR ReadqPCR qPCR ReadqPCR

11.9 years ago boczniak767 ▴ 740

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qpcrNorm ReadqPCR qpcrNorm ReadqPCR

12.3 years ago Mueller, Alan ▴ 20

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1.4k

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GO ReadqPCR NormqPCR GO ReadqPCR NormqPCR

updated 12.9 years ago by james perkins ▴ 300 • written 12.9 years ago by Pepijn Kooij ▴ 10

7 results • Page 1 of 1

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Comment: ISO a solution to rank-order introns by transcript by mat149 ▴ 80

Hey, In revisiting this question, the following code works for the '+' strand. I am having issues with demarcating intron rank by transcri…

Comment: Normalizing batch effects using technical replicates for DGE analysis between tw by Gordon Smyth 52k

Since the intra-block correlation is negative, it would be best to remove `block` from the model. My experience with genetically identical…

Comment: Normalizing batch effects using technical replicates for DGE analysis between tw by anna.cot.anna.cot ▴ 30

Thank you! This is actually quite close to my real dataset. I simplified the names to make it easier as an example, but I have now correcte…

Comment: how should I apply "cpg.annotate" to TCGA methylation data in hg38 for HM450K? by Tim Peters ▴ 200

Hi Xiaofei, Is it possible to generate a matrix of beta values or M-values with rownames as probe IDs from this data? If so, cpg.annotate(…

Comment: Normalizing batch effects using technical replicates for DGE analysis between tw by Gordon Smyth 52k

That looks basically correct, although the terms that you are inputing to `makeContrasts` do not match the condition names in the targets f…

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A: importing RSEM data into DESeq2

A: Expected counts from RSEM in DESeq2

A: DESeq2 Following RSEM

A: Using RSEM reads for DESeq2

Answer: nightmare to make custom txdb for genomes from ToxoDB

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