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readqpcr
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Incompatible phenoData object error in ReadqPCR package
ReadqPCR
phenoData object
4.9 years ago
jchoza
• 0
0
votes
0
replies
2.0k
views
reading qRT-PCR data
ddCt
HTqPCR
ReadqPCR
ddCt
HTqPCR
ReadqPCR
10.0 years ago
Guest User
★ 13k
0
votes
2
replies
3.0k
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ReadqPCR: [[hkgs,]] incorrect number of dimensions
ReadqPCR
NormqPCR
ReadqPCR
NormqPCR
updated 11.1 years ago by
James Perkins
▴ 120 • written 11.1 years ago by
Guest User
★ 13k
0
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0
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1.1k
views
HTqPCR
convert
qpcrNorm
ddCt
HTqPCR
ReadqPCR
convert
qpcrNorm
ddCt
HTqPCR
ReadqPCR
11.2 years ago
Guest User
★ 13k
1
vote
1
reply
1.2k
views
qRT-PCR - reading tab-delimited file (biol & tech replicates)
qPCR
ReadqPCR
qPCR
ReadqPCR
11.2 years ago
boczniak767
▴ 720
0
votes
0
replies
1.1k
views
readQpcrBatch function in qpcrNorm
qpcrNorm
ReadqPCR
qpcrNorm
ReadqPCR
11.6 years ago
Mueller, Alan
▴ 20
0
votes
1
reply
1.2k
views
NormqPCR and ReadqPCR
GO
ReadqPCR
NormqPCR
GO
ReadqPCR
NormqPCR
updated 12.2 years ago by
james perkins
▴ 300 • written 12.2 years ago by
Pepijn Kooij
▴ 10
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Answer: PCA plot suggestions
by
Michael Love
41k
For help with interpretation and design of analysis, I recommend working with a local statistician. Due to time restrictions, I can only…
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
by
ussarizona
▴ 10
Hi Michael, Yes, I could figure it out what does the error mean. In my matrix I had the first colum GeneID while in my condition I only h…
Answer: Deseq2. decontXcounts not integers. Useful alternative?
by
Michael Love
41k
Another option would be to put the per sample estimated contamination in the design. This is for example how RUV etc help remove spurious D…
Answer: ATACseq merge peaks
by
ATpoint
★ 4.0k
That depends on your analysis. Typically, for differential analysis (and convenience) you would produce a single set of peaks (e.g. by merg…
Comment: Deseq2. decontXcounts not integers. Useful alternative?
by
camp
▴ 10
Yes, @atpoint is correct. decontX decontaminated counts are not integers due to the way the variation inference algorithm works, but you ca…
Votes
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
Comment: Deseq2. decontXcounts not integers. Useful alternative?
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
biomaRt error: database disk image is malformed
Comment: biomaRt : No lock file for BiocFileCache
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