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Soggi regionPlot function gave error when import bigwig file with "percentOfRegion" mode
soGGi chip-seq region
updated 3.8 years ago by ▴ 400 • written 3.9 years ago by • 0
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Plotting Differentially Methylated Regions
minfi bumphunter 450k region
updated 4.5 years ago by ▴ 70 • written 5.3 years ago by ▴ 40
2 results • Page 1 of 1
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Comment: genomicElementDistribution function not found by Arunima • 0
> Package: ChIPpeakAnno Type: Package Version: 3.0.0 Date: 2014-10-24 License: LGPL LazyLoad: yes I have the following package installed …
Answer: genomicElementDistribution function not found by James W. MacDonald 57k
Have you already loaded the package? Also, this part of the default question ``` # include your problematic code here with any corres…
Comment: deseq2 normalized data with heatmap by Ian ▴ 10
Got it, thank you! I will use vsd and potentially scale from there.
Comment: change text size in plotmd functtion by najib • 0
thank you a lot.
Comment: Import MetaPhlAn3 to Phyloseq by Levi Waldron 1.1k
Hi Saraswati, thanks for your interest in that function. Just to clarify for others, it's not part of the curatedMetagenomicData package or…
Votes
A: Deseq2 use fpkm
Comment: deseq2 normalized data with heatmap
Comment: deseq2 normalized data with heatmap
Comment: change text size in plotmd functtion
Answer: change text size in plotmd functtion
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