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rmat
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rMAT install error
rMAT
rMAT
10.4 years ago
周在威
▴ 20
0
votes
0
replies
749
views
-lm-lgomp (without a space) when building rMAT
rMAT
rMAT
11.6 years ago
Paul Hatton
▴ 10
0
votes
2
replies
1.2k
views
Reading .bpmap files for homemade tiling arrays
rMAT
rMAT
updated 14.1 years ago by
Raphael Gottardo
▴ 40 • written 14.1 years ago by
Larry Singh
▴ 20
0
votes
0
replies
810
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Reading .bpmap files for homemade tiling arrays
rMAT
rMAT
14.1 years ago
Patrick Schorderet
▴ 50
0
votes
7
replies
1.4k
views
rMAT tutorial. Data file too large?
Preprocessing
GUI
rMAT
Preprocessing
GUI
rMAT
14.1 years ago
Patrick Schorderet
▴ 50
0
votes
1
reply
904
views
Problems using rMAT tutorial
GUI
rMAT
GUI
rMAT
updated 14.2 years ago by
Wolfgang Huber
★ 13k • written 14.2 years ago by
Patrick Schorderet
▴ 50
0
votes
1
reply
1.1k
views
Please Help with rMAT: NAs in Enrich Object
Normalization
Preprocessing
rtracklayer
IRanges
rMAT
Normalization
Preprocessing
IRanges
updated 14.5 years ago by
Martin Morgan
25k • written 14.5 years ago by
Noah Dowell
▴ 410
0
votes
1
reply
1.2k
views
Installing rMAT
rMAT
rMAT
updated 15.0 years ago by
Vincent J. Carey, Jr.
6.7k • written 15.0 years ago by
Rodrigo Drummond
▴ 10
8 results • Page
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Comment: Most enriched pathway is not expressed when modifying universe parameter
by
adripel
• 0
Well, I was looking at the result table (enrich18k@result, or yy@result in your example), and it gives every pathway even the non-significa…
Comment: Trouble reading samplesheet in with diffbind to create dba
by
Mallory
• 0
Thank you for your reply! There mustve been something wierd going on with my peak formats as you pointed out. I recalled all the peaks and …
Answer: Trouble reading samplesheet in with diffbind to create dba
by
Anthony
• 0
I was struggling with this today too. For me it happened because my peak files were not in the correct format. The "10 elements" refers to …
Comment: gds in GEOmetadb 2023-06-26 version is empty
by
Frederico Moraes Ferreira
▴ 100
Try axel -n 20 https://gbnci.cancer.gov/geo/GEOmetadb.sqlite.gz
Comment: Most enriched pathway is not expressed when modifying universe parameter
by
James W. MacDonald
66k
The default for `enrichGO` is to subset to those with a p-value<0.05. You don't adjust that default argument, so you shouldn't have any GO …
Votes
A: limma: comparison of repeat measurements - blocking or within-subject correlatio
A: dream vignette says limma-voom repeated measures two-group comparison needs two
Answer: Get the latest gene name from Entrez ID
Get the latest gene name from Entrez ID
Answer: biomaRt not working - lazy table error
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