Showing : rmat • reset
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rMAT install error
rMAT rMAT
11.8 years ago 周在威 ▴ 20
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928
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-lm-lgomp (without a space) when building rMAT
rMAT rMAT
13.0 years ago Paul Hatton ▴ 10
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2
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1.4k
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Reading .bpmap files for homemade tiling arrays
rMAT rMAT
updated 15.5 years ago by ▴ 40 • written 15.5 years ago by ▴ 20
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1.0k
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Reading .bpmap files for homemade tiling arrays
rMAT rMAT
15.5 years ago Patrick Schorderet ▴ 50
0
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7
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2.0k
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rMAT tutorial. Data file too large?
Preprocessing GUI rMAT Preprocessing GUI rMAT
15.6 years ago Patrick Schorderet ▴ 50
0
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1
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1.1k
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Problems using rMAT tutorial
GUI rMAT GUI rMAT
updated 15.6 years ago by ★ 13k • written 15.6 years ago by ▴ 50
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1
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1.4k
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Please Help with rMAT: NAs in Enrich Object
Normalization Preprocessing rtracklayer IRanges rMAT Normalization Preprocessing IRanges
updated 15.9 years ago by 25k • written 15.9 years ago by ▴ 410
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1
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1.4k
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Installing rMAT
rMAT rMAT
updated 16.4 years ago by 6.7k • written 16.4 years ago by ▴ 10
8 results • Page 1 of 1
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Answer: Add additional maintainer for MOFA2 by shepherl 4.2k
These requests are best on the bioc-devel @ r-project.org or a request to maintainer @ bioconductor.org -- We would ideally need the curre…
Answer: After running samtools, the featureCounts command crashed. by Kevin Blighe ★ 4.0k
Hi Rui Tang, The "buffer overflow detected" error in featureCounts usually stems from a corrupted or malformed GTF file, often due to tr…
Answer: Problem with the TMB plot by Kevin Blighe ★ 4.0k
Hi, The linear TMB plot with no clustering suggests your variant calls may lack sample-specific discrimination, likely due to filtering ap…
Answer: gene Set with high AUC score but no cells assigned to cell type by Kevin Blighe ★ 4.0k
Hi, You have correctly identified the issue: AUCell's automatic threshold selection is conservative by design, aiming for specificity to…
Answer: featureCounts -L: high unassigned:mapq fraction by Kevin Blighe ★ 4.0k
Hi Katarzyna, The discrepancy arises because your samtools stats were restricted to genic regions only, where alignments are typically o…
Votes
Answer: DESeq2 design for haplotype MPRA
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Suppress warning in RHDF5 write
Answer: Suppress warning in RHDF5 write
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