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rmir
•
reset
0
votes
0
replies
754
views
RmiR and RmiR.Hs.miRNA
miRNA
RmiR
miRNA
RmiR
10.4 years ago
Thomas Hampton
▴ 750
0
votes
0
replies
882
views
BioC package for miRNA target scanning (or displaying results from databases)
miRNA
RmiR
miRNA
RmiR
11.9 years ago
James F.Reid
▴ 10
0
votes
0
replies
869
views
miRNA target prediction algorithm setting used in RmiR.Hs.miRNA package.
miRNA
RmiR
miRNA
RmiR
13.0 years ago
Paul Geeleher
★ 1.3k
0
votes
0
replies
823
views
RmiR: mapping miRNA to probe_id for Affy mogene10st
miRNA
Annotation
RmiR
miRNA
Annotation
RmiR
13.3 years ago
Mary Putt
▴ 100
0
votes
1
reply
875
views
Problem with createAnnObjs.HUMANCHIP_DB
hgug4112a
RmiR
hgug4112a
RmiR
updated 13.9 years ago by
Martin Morgan
25k • written 13.9 years ago by
Wendelin Waunzel
▴ 10
0
votes
0
replies
860
views
pair information of microRNA and Targets prediction
microRNA
RmiR
microRNA
RmiR
14.2 years ago
jrwang@itri.org.tw
▴ 60
6
votes
2
replies
968
views
pair information of microRNA and Targets prediction
microRNA
RmiR
microRNA
RmiR
updated 14.2 years ago by
Laurent Gautier
★ 2.3k • written 14.2 years ago by
jrwang@itri.org.tw
▴ 60
0
votes
0
replies
873
views
Questions on the package "RmiR"
miRNA
hgug4112a
RmiR
miRNA
hgug4112a
RmiR
14.2 years ago
jason0701
▴ 190
8 results • Page
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Answer: ATACseq merge peaks
by
ATpoint
★ 4.0k
That depends on your analysis. Typically, for differential analysis (and convenience) you would produce a single set of peaks (e.g. by merg…
Comment: Deseq2. decontXcounts not integers. Useful alternative?
by
camp
▴ 10
Yes, @atpoint is correct. decontX decontaminated counts are not integers due to the way the variation inference algorithm works, but you ca…
Comment: Deseq2. decontXcounts not integers. Useful alternative?
by
ATpoint
★ 4.0k
I do not know this decontamination tool you use but generally: If these counts are basically "corrected" raw counts in the sense that they'…
Answer: Improving the design matrices vignette in RNAseq123
by
Gordon Smyth
50k
Thanks to Shian Su, we have confirmed that the problem in the design matrices vignette html is caused by a bug in knitr 1.44 (to do with sp…
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
by
winwater0928
• 0
Thank you for your comment! I'll review my code from top to bottom.
Votes
Comment: Deseq2. decontXcounts not integers. Useful alternative?
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
biomaRt error: database disk image is malformed
Comment: biomaRt : No lock file for BiocFileCache
Answer: Cross-species analysis - how to compute the mid parent value?
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