Bioconductor Rnaseqcomp

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rnaseqcomp

updated 14 months ago by Gordon Smyth 52k • written 14 months ago by kay2023 • 0

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RNASeqData rnaseqcomp RNASeq

updated 18 months ago by ATpoint ★ 4.7k • written 18 months ago by jg0428 • 0

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RNAinteract rnaseqGene RNASeqRData rnaseqcomp

4.1 years ago Bogdan ▴ 670

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Comment: DiffBind custom normalization factor by Abbie • 0

Hello! Thanks so much for adding dba.normalize and all the documentation in the manual! I'm hoping I can ask a follow-up question here. I…

Answer: CpGs with genomic positions greater than the chromosome size in EPICv2? by James W. MacDonald 68k

All of the annotation packages provided by Bioconductor are simply repackaging of existing data from one or more sources. In this case, the…

Comment: Using TPM from tximport of Salmon output for singscore by Kent • 0

Thank you for the suggestions Michael. Would you say that after filtering out the low count genes, `rlog(counts, blind = T)` is doing the s…

Comment: Using TPM from tximport of Salmon output for singscore by Michael Love 43k

For clustering generally we recommend `vst()` see the workflow for example. For working with individual samples, I can see how a scaling/t…

Comment: DESeq2 model - How to test case/control time course model when taking account wi by Michael Love 43k

I'd recommend working with a local statistician or someone familiar with linear models in R. I have to reserve my time on the support site …

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clusterProfiler-GO enrichment Error

A: Machine learning in R book

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