Bioconductor Rnaseqcomp

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RNASeqData rnaseqcomp RNASeq

updated 8 months ago by ATpoint ★ 4.1k • written 8 months ago by jg0428 • 0

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RNAinteract rnaseqGene RNASeqRData rnaseqcomp

3.2 years ago Bogdan ▴ 670

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rnaseqcomp

updated 3 months ago by Gordon Smyth 50k • written 4 months ago by kay2023 • 0

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Comment: Couldn't connect to server while using "pathways" by ATpoint ★ 4.1k

Please understand that we neither can see your screen, nor read minds. You at least need to provide the line of code and the name of the pa…

Answer: Method to find pathways different between 2 groups by Gordon Smyth 50k

> When I search camera limma on pubmed, I found 2 papers I am unclear what point you are trying to make. limma's camera method has been fo…

Comment: package goseq seems to be not available on the latest version of R by Gordon Smyth 50k

limma most certainly is available. It installs in R 4.4.0 and Bioc 3.19 for all platforms without any issues. It has not had any period of …

Comment: package goseq seems to be not available on the latest version of R by Patrycja ▴ 20

limma package also isn't available.Is there any information when these packages will be available?

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 41k

Check the number of bootstrapped data per chromosome compared to the original, and then you can also look at its distribution. For this it'…

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Answer: fgsea significant result

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