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Comment: After running samtools, the featureCounts command crashed.
by
eja.gssssse.r.m
•
0
The buffer overflow detected error in your featureCount step usually indicates that the program is trying to write more data into memory …
Comment: gene Set with high AUC score but no cells assigned to cell type
by
eja.gssssse.r.m
•
0
It sounds like your AUCell results may be showing high AUC scores without cell assignment due to thresholding or scoring cutoffs. Think of …
Answer: "Watched Tags" are being erased rather than updated
by
shepherl
4.2k
This should now be resolved
Answer: Question about collapsing ASVs by genus level during DESeq2 analysis
by
Michael Love
43k
I'll just note that microbiome stats folks tend to use other tools than DESeq2.
> several ASVs belong to the same genus but are not iden…
Comment: Integration: Paired-end vs healthy single-end from a different source
by
igkryycpinmshzugby
•
0
Yes, Option 1 (technical homogenization) reprocessing paired-end samples as single-end using only R1 is the most defensible approach when l…
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