Showing : salmon rna seq • reset
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DEseq2 with different fastq read numbers after salmon
deseq2 salmon rna seq salmon
updated 7.0 years ago by 43k • written 7.0 years ago by ▴ 10
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5
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2.6k
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salmon output file for differential expression analysis
salmon rna seq deseq2
updated 7.0 years ago by 43k • written 7.0 years ago by • 0
0
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1
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1.7k
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Using TPM of a specific isoform as a phenotype for gene set enrichment analysis
deseq2 gsea tpm rnaseq salmon rna seq
updated 7.0 years ago by 43k • written 7.1 years ago by • 0
3
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4
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2.1k
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tximport and de novo transcriptome
tximport salmon rna seq de novo
updated 7.1 years ago by 68k • written 7.1 years ago by ▴ 10
2
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9
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2.5k
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stageR NA in getAdjustedPValues() (method=dtu)
drimseq stageR dtu salmon rna seq
updated 7.3 years ago by ▴ 180 • written 7.3 years ago by ▴ 60
1
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1
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1.2k
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Post-processing RNA-Seq after tximport
salmon rna seq tximport ruv-seq deseq2
updated 7.5 years ago by 43k • written 7.5 years ago by • 0
3
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3
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3.1k
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Using sluth with Salmon data, error while sleuth_prep
sleuth R salmon rna seq salmon
8.0 years ago Walter F. Baumann ▴ 10
0
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1
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1.6k
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Salmon RNA Seq
salmon rna seq
updated 8.1 years ago by 43k • written 8.1 years ago by ▴ 30
8 results • Page 1 of 1
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Comment: Failure to download resources (MeSHDb) from AnnotationHub by Steve Lianoglou ★ 13k
That fixed it, thanks Lori!
Comment: Suppress warning in RHDF5 write by nicolas.lhuillier • 0
Thanks a lot for the quick and effective reply. I had tried "suppressWarnings" but not "suppressMessages".
Answer: Suppress warning in RHDF5 write by James W. MacDonald 68k
``` > fun <- function() message("this is a message") > fun() this is a message > suppressMessages(fun()) > ```
Answer: Failure to download resources (MeSHDb) from AnnotationHub by shepherl 4.2k
apologies. These are contributed by someone outside the core team. On upload I did not realize they included the older Bioconductor storage…
Answer: "Watched Tags" are being erased rather than updated by shepherl 4.2k
This should now be resolved
Votes
Answer: DESeq2 design for haplotype MPRA
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Suppress warning in RHDF5 write
Answer: Suppress warning in RHDF5 write
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