Bioconductor Sim

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PhenoGeneRanker BSgenome.Osativa.MSU.MSU7 mouse.db0 SIM

11 months ago Abu 0

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2.6k

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SIM pathview SIM pathview

11.9 years ago Luo Weijun ★ 1.6k

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probe affy oligo SIM farms probe affy oligo SIM farms

12.2 years ago Djork Clevert ▴ 210

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Pathways graph PROcess SIM gage pathview Pathways graph PROcess SIM gage pathview

updated 12.5 years ago by Ed ▴ 230 • written 12.5 years ago by Luo Weijun ★ 1.6k

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SNP Annotation probe annotate SIM SNP Annotation probe annotate SIM

13.2 years ago Guest User ★ 13k

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1.9k

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Pathways Organism SIM KEGGgraph Pathways Organism SIM KEGGgraph

updated 16.2 years ago by Marc Carlson ★ 7.2k • written 16.2 years ago by Fraser Sim ▴ 270

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Rgraphviz SIM Rgraphviz SIM

updated 16.8 years ago by Patrick Aboyoun ★ 1.6k • written 16.8 years ago by ravi ▴ 130

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Rgraphviz SIM Rgraphviz SIM

updated 16.9 years ago by Martin Morgan 25k • written 16.9 years ago by Sim, Fraser ▴ 350

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genefilter affy limma GeneSpring affylmGUI GLAD SIM genefilter affy limma GeneSpring

17.6 years ago Mark Cowley ▴ 400

9 results • Page 1 of 1

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Comment: Error message that there is no package called Biobase by DamionLedner99 • 0

thanks for sharing!!! https://cran.r-project.org/

Comment: msmsTests, inconsistent sign between lFC.Av and LogFC by Ben • 0

Continued here due to posting difficulties: Extract from the results table: ``` Inhibitor Vehicle lFC.Av LogFC ... F1 0.0 27…

Answer: DESeq2 for 16S rRNA Analysis by James W. MacDonald 68k

The Wald test is only meant for comparison of two groups at a time, so it depends on what you mean by 'analyze across multiple groups at a …

Comment: MetaDE.pvalue: Error in xj[i]: invalid subscript type 'list' by varying.mastodon.isyn • 0

Oh, that error! I remember wrestling with that one for hours when I was first learning Python. Turns out I was trying to use a list itself …

Comment: Confirm that OpenStats will not be archived (pryr dependency) by Marina • 0

Thank you!

Votes

Answer: What happens to genes with low dispersion during dispersion shrinkage in DESeq2

Comment: Are transformed values from rlog /vst log2 normalized counts?

Answer: Are transformed values from rlog /vst log2 normalized counts?

A: DESeq2 normalization vs VST vs rlog

Answer: How to directly decet the outlier samples (libraries) in EdgeR pipeline

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Teacher to Michael Love 43k

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Popular Question to James W. MacDonald 68k