Bioconductor Singler

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4.4k

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SingleR

updated 12 days ago by lisia • 0 • written 7 months ago by saeed.khalili • 0

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3.6k

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seurat singleR

updated 10 months ago by Marco • 0 • written 4.4 years ago by mathai.c • 0

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2.6k

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SingleCellSignalR SingleCellWorkflow SingleR

updated 5 months ago by Assa Yeroslaviz ★ 1.5k • written 3.0 years ago by FantasticAI ▴ 10

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1.6k

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SingleR SeuratscRNA

written 4 months ago by Bine ▴ 40

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1.2k

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SingleR

written 4 months ago by Bine ▴ 40

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930

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SingleR SingleCellExperiment

4 months ago elgomez • 0

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891

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singleR SingleCellExperiment SingleCellData

10 months ago Matvii Mykhailichenko • 0

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782

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SingleR

updated 11 months ago by Irish • 0 • written 17 months ago by carlo • 0

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743

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SingleR Seurat

updated 5 months ago by ATpoint ★ 4.0k • written 5 months ago by Assa Yeroslaviz ★ 1.5k

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527

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SingleR

10 months ago Yijing • 0

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469

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RNASeq ditto dittoSeq SingleR

written 3 months ago by Fayrouz • 0

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309

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SingleR

updated 5 months ago by Peter Hickey ▴ 740 • written 5 months ago by jgattiker • 0

12 results • Page 1 of 1

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Comment: Why p value inconsistent when using different number of pathway score? by Chris • 0

Hi Robert, if two conditions don't have hundreds of differential express genes ( in some conditions such as peripheral blood Alzheimer vs n…

Answer: Dominance Index for Shotgun Metagenomics Data by Leo Lahti ▴ 40

1. Note that Simpson's dominance index (\lambda) is a different index than inverse Simpson (1/\lambda) or reciprocal Simpson (1-\lambda). T…

Comment: Math expression in shapeCustom legend in EnhancedVolcano by pl23 • 0

Thank you very much - that worked perfectly! Word of warning to those who try this: it screws up the other legends because of the markdown …

Answer: PCA plot suggestions by Michael Love 41k

For help with interpretation and design of analysis, I recommend working with a local statistician. Due to time restrictions, I can only…

Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length by ussarizona ▴ 10

Hi Michael, Yes, I could figure it out what does the error mean. In my matrix I had the first colum GeneID while in my condition I only h…

Votes

Answer: Dominance Index for Shotgun Metagenomics Data

Answer: Math expression in shapeCustom legend in EnhancedVolcano

Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length

Comment: Deseq2. decontXcounts not integers. Useful alternative?

Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)

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