Showing : sleuth • reset
2
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2
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2.3k
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RUVg with differential transcript expression?
ruvseq sleuth
updated 7.0 years ago by ▴ 980 • written 7.0 years ago by • 0
3
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3
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2.8k
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Using sluth with Salmon data, error while sleuth_prep
sleuth R salmon rna seq salmon
7.1 years ago Walter F. Baumann ▴ 10
1
vote
1
reply
6.2k
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DESeq2 with continuous variables - predictors and/or outcomes
deseq2 negative binomial model robust regression sleuth
updated 7.5 years ago by 43k • written 7.5 years ago by • 0
0
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4
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2.3k
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Error: Pathway analysis using Sleuth results
pathview gage rna-seq R sleuth
8.0 years ago bioinf ▴ 10
4 results • Page 1 of 1
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Comment: Perform gene set enrichment analysis using fgsea on two conditions that don't ha by freemanmclaughlin9969289 • 0
Tools such as Pathway Analysis with Deweighting of Overlapping Genes ([block blast][1]) or Gene Set Enrichment Analysis for Single Cell RNA…
Comment: How to get around the warning message: mzR has been built against a different Rc by Nan • 0
Hello, I was wondering if you were able to resolve this issue? I've recently encountered a similar problem and would like to ask for your a…
Answer: EuroBioC2023 abstract submission closing soon! by excess.gecko.shso • 0
Don't miss out! EuroBioC2023 abstract submissions are nearing the deadline. Sharpen your scientific [Wordle Game][1] skills and submit your…
Answer: EuroBioC2024 abstract submission is open! by excess.gecko.shso • 0
EuroBioC2024 abstract submissions are now open! Join the Oxford conference from Sep 4-6. Submit your abstract by April 26 for short talks, …
Comment: Cross-validation with multiple control subgroups in limma by Ali Barry ▴ 40
Thanks so much for taking the time here, the insights are much appreciated. I suspected I'd have to ad hoc compare results if I did repeat …
Votes
Answer: Can DESeq2's design compensate for sequencing experimental design shortcomings?
Comment: Issues with seqlevelsStyle when making custom txdb objects for genomes/annotatio
C: edgeR and lack of counts ID on CPM matrix
A: DESeq2 Following RSEM
A: importing RSEM data into DESeq2
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