Bioconductor Supervised

Showing : supervised • reset

4

votes

5

replies

5.0k

views

supervised edgeR variance RNASeq heatmaps

updated 23 months ago by Gordon Smyth 52k • written 2.1 years ago by mohammedtoufiq91 ▴ 10

0

votes

6

replies

9.3k

views

deseq2 supervised

9.9 years ago • updated 9.8 years ago aristotele_m ▴ 40

2 results • Page 1 of 1

Recent ...

Replies

Answer: promoters_txdb <- promoters(txdb, upstream = 2000) is not 2000 by James W. MacDonald 67k

If you use `promoters` and do not provide an argument for something that has a default, you will get the default argument. Your last call t…

Comment: org.Hs.eg.db issue by k.panov • 0

installed R on another PC, works perfectly. ergo, problem outside of R probably..... :-(

Comment: MBDseq analysis using qsea package by Lukas ▴ 20

Hi, I checked in with Matthias and here is his response: You need to indicate "samples": "The indices of the samples for which individu…

Comment: DESeq2 analysis with transcript counts by sindhuri • 0

Thank you for the response. Currently I am using the R studio for analysis and Im running DESeq2 for analysis of the **transcript counts.ts…

Comment: iam not able to do retrive data using GEOquery R package by James W. MacDonald 67k

Another alternative is to use the `GEOmetadb` package ([vignette here)][1], which will allow you to make queries to identify GEO datasets t…

Votes

A: Linear regression in DESeq2

Awards • All