Showing : svn • reset
6
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News: Bioconductor git server is now LIVE!
git github svn git-svn bridge git mirror News
8.3 years ago nitesh.turaga ▴ 140
1
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1.7k
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News: Git transition is on August 16th.
git svn News
8.3 years ago nitesh.turaga ▴ 140
4
votes
1
reply
3.0k
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News: Bioconductor git transition BETA phase starts now.
git svn infrastructure bioconductor News
8.4 years ago nitesh.turaga ▴ 140
0
votes
2
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2.0k
views
New functions to UniProt.ws
uniprot.ws svn git
updated 9.2 years ago by ★ 6.8k • written 9.2 years ago by • 0
0
votes
1
reply
1.4k
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commit changes with scenario 1
Git mirror scenario 1 svn
9.4 years ago kmezhoud ▴ 10
0
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1
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2.4k
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Is forbidden by the server
svn
updated 9.6 years ago by ★ 8.2k • written 9.6 years ago by • 0
0
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1
reply
1.7k
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Error pushing to svn from git
git-svn bridge svn
10.1 years ago Tim Peters ▴ 230
0
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2
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1.4k
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Forgot password to update Bioconductor package
bioconductor svn
10.1 years ago sezimmer • 0
2
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7
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1.8k
views
Is there a way to find corresponding svn revision for the current /devel/src/contrib/PACKAGES and /release?
svn PACKAGES
updated 10.7 years ago by ★ 8.2k • written 10.7 years ago by • 0
9 results • Page 1 of 1
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Comment: DECIPHER DesignProbes unable to design FISH-probes by Erik Wright ▴ 150
Are the sequences aligned (i.e., the same width) before running `TileSeqs()`?
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Michael Love 43k
BTW, I tested with no issue on MacOS ARM on our previous github issue.
Answer: DESeq(dds, parallel=TRUE) wrong args for environment subassignment by Michael Love 43k
The DESeq2 error makes sense, as we've talked about, given that the simple `bplapply` isn't working in your setup. Maybe give the traceb…
Answer: PTM analysis in LIMPA by Gordon Smyth 53k
For PTM analysis, the usual quantification command dpcQuant() is replaced by dpcImpute(). Otherwise the limpa pipeline is the same as for a…
Answer: problem reading bam files into nucleR by James W. MacDonald 68k
The first step is to update to the current versions of R/Bioconductor and try again. It's possible that you have run into a bug that's alre…
Votes
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
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Popular Question to Gordon Smyth 53k
Commentator to sina.nassiri ▴ 130
Popular Question to Hervé Pagès 16k
Popular Question to jared.andrews07 ▴ 30
Popular Question to James W. MacDonald 68k
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