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News:
Bioconductor git server is now LIVE!
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8.3 years ago
nitesh.turaga
▴ 140
1
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News:
Git transition is on August 16th.
git
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8.4 years ago
nitesh.turaga
▴ 140
4
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3.1k
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News:
Bioconductor git transition BETA phase starts now.
git
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infrastructure
bioconductor
News
8.5 years ago
nitesh.turaga
▴ 140
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2
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2.0k
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New functions to UniProt.ws
uniprot.ws
svn
git
updated 9.2 years ago by
Valerie Obenchain
★ 6.8k • written 9.2 years ago by
Csaba Ortutay
• 0
0
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1
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1.4k
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commit changes with scenario 1
Git mirror
scenario 1
svn
9.4 years ago
kmezhoud
▴ 10
0
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1
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2.4k
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Is forbidden by the server
svn
updated 9.7 years ago by
Dan Tenenbaum
★ 8.2k • written 9.7 years ago by
gobbi.andrea
• 0
0
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1
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1.7k
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Error pushing to svn from git
git-svn bridge
svn
10.1 years ago
Tim Peters
▴ 230
0
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2
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1.4k
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Forgot password to update Bioconductor package
bioconductor
svn
10.2 years ago
sezimmer
• 0
2
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7
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1.8k
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Is there a way to find corresponding svn revision for the current /devel/src/contrib/PACKAGES and /release?
svn
PACKAGES
updated 10.8 years ago by
Dan Tenenbaum
★ 8.2k • written 10.8 years ago by
levk
• 0
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Answer: DESeq2 - how many surrogate variables from svaseq, use of lfcshrink
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aqeel
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Discover the pinnacle of Brazilian Jiu Jitsu gear at [Dragon][1] GI. [1]: https://dragongi.com/
Comment: How does contrasts.fit do in limma to extract comparisons with a model having in
by
Gordon Smyth
53k
I refered you to the DiffVar package 11 months ago. Did you consider it? Your clarification makes it clear that your issue is not with lim…
Comment: How does contrasts.fit do in limma to extract comparisons with a model having in
by
jtsy6383
• 0
Thanks for the reply Gordon. I am also working on the project and have been tasked to reformulate and add some details. We're interested i…
Answer: How does contrasts.fit do in limma to extract comparisons with a model having in
by
Gordon Smyth
53k
The limma Users Guide explains how to test for interactions or to test for contrasts very easily. limma can work with any design matrix, bu…
Answer: NUPOP usage
by
shepherl
4.2k
You should read the documentation in the package especially the package vignette https://bioconductor.org/packages/release/bioc/html/NuPoP.…
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C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
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