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svn
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News:
Bioconductor git server is now LIVE!
git
github
svn
git-svn bridge
git mirror
News
7.6 years ago
nitesh.turaga
▴ 140
1
vote
0
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1.5k
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News:
Git transition is on August 16th.
git
svn
News
7.6 years ago
nitesh.turaga
▴ 140
4
votes
1
reply
2.8k
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News:
Bioconductor git transition BETA phase starts now.
git
svn
infrastructure
bioconductor
News
7.7 years ago
nitesh.turaga
▴ 140
0
votes
2
replies
1.8k
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New functions to UniProt.ws
uniprot.ws
svn
git
updated 8.5 years ago by
Valerie Obenchain
★ 6.8k • written 8.5 years ago by
Csaba Ortutay
• 0
0
votes
1
reply
1.2k
views
commit changes with scenario 1
Git mirror
scenario 1
svn
8.6 years ago
kmezhoud
▴ 10
0
votes
1
reply
2.2k
views
Is forbidden by the server
svn
updated 8.9 years ago by
Dan Tenenbaum
★ 8.2k • written 8.9 years ago by
gobbi.andrea
• 0
0
votes
1
reply
1.5k
views
Error pushing to svn from git
git-svn bridge
svn
9.4 years ago
Tim Peters
▴ 230
0
votes
2
replies
1.2k
views
Forgot password to update Bioconductor package
bioconductor
svn
9.4 years ago
sezimmer
• 0
2
votes
7
replies
1.5k
views
Is there a way to find corresponding svn revision for the current /devel/src/contrib/PACKAGES and /release?
svn
PACKAGES
updated 10.0 years ago by
Dan Tenenbaum
★ 8.2k • written 10.0 years ago by
levk
• 0
9 results • Page
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Answer: Use of org.Rn.eg.db with GRCr8 reference genome
by
James W. MacDonald
68k
You've got it backwards. It should be ``` adult_res_df$symbol <- mapIds(org.Rn.eg.db, keys = rownames(adult_res_df), column = "ENSEMBL"…
Comment: DESeq2 swap ensembl gene id rownames with gene symbol column
by
Erika
• 0
Alternatively, you could have added a column with the common gene names. Assuming your dataframe `df` was created using `DESeq()`, somethin…
Answer: Clarification on GOALL / GO2ALLORFs mapping
by
James W. MacDonald
68k
It appears that 'negative regulation of glycogen biosynthesis' has an 'is a' relationship with 'glycogen biosynthetic process' https://www.…
Comment: Can't post a question?
by
DavideSant
• 0
Thank you, this was super useful!
Comment: Error in retrieving clinical data
by
silickas
• 0
Thank you for the reply. I will try to do that next time. This time instead, I used the GenomicDataCommons package to download clinical dat…
Votes
Comment: Can't post a question?
Answer: Limma - Complex 2-way multi-level contrast with paired samples
Answer: [ChIP-seq] DESeq2 on counts matrix from union set of called peaks
Help with creation of an OrgDB package and conduction of a bioinformatical analysis of gene expression
Answer: Loading Ensembl 98 EnsDb from Annotation Hub fails with database disk image malf
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