Bioconductor Swish

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swish fishpond GenomicFeatures tximeta

updated 21 months ago by Michael Love 41k • written 2.1 years ago by jvandinter • 0

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1.0k

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fishpond swish

10 months ago Miguel ▴ 20

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874

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fishpond swish

updated 3.9 years ago by Michael Love 41k • written 3.9 years ago by 1911449 • 0

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1.3k

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swish fishpond

3.6 years ago thomas.dugedebernonville • 0

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1.3k

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Swish fishpond

3.3 years ago • updated 3.2 years ago 675743 ▴ 20

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2.0k

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DESeq2 fishpond salmon swish

2.7 years ago • updated 2.6 years ago Qin ▴ 10

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1.0k

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tximeta DESeq2 swish fishpond

updated 2.3 years ago by Michael Love 41k • written 2.3 years ago by jeremymsimon ▴ 20

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1.4k

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salmon rna-seq swish bootstrap fishpond

updated 2.2 years ago by Michael Love 41k • written 2.2 years ago by samuelcjx • 0

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1.7k

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tximport DESeq2 edgeR swish miRNA

updated 22 months ago by Michael Love 41k • written 22 months ago by BG • 0

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1.3k

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swish fishpond DifferentialExpression

21 months ago jvandinter • 0

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1.4k

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fishpond swish

2.2 years ago msll0802 • 0

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1.4k

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tximeta swish fishpond

updated 3.0 years ago by Michael Love 41k • written 3.0 years ago by Jack Riley • 0

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687

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rna-seq salmon fishpond swish

updated 10 months ago by Michael Love 41k • written 10 months ago by samuelcjx • 0

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306

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swish salmon fishpond

updated 3 months ago by Michael Love 41k • written 3 months ago by Nicholas • 0

14 results • Page 1 of 1

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Answer: Method to find pathways different between 2 groups by Gordon Smyth 50k

> When I search camera limma on pubmed, I found 2 papers I am unclear what point you are trying to make. limma's camera method has been fo…

Comment: package goseq seems to be not available on the latest version of R by Gordon Smyth 50k

limma most certainly is available. It installs in R 4.4.0 and Bioc 3.19 for all platforms without any issues. It has not had any period of …

Comment: package goseq seems to be not available on the latest version of R by Patrycja ▴ 20

limma package also isn't available.Is there any information when these packages will be available?

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 41k

Check the number of bootstrapped data per chromosome compared to the original, and then you can also look at its distribution. For this it'…

Comment: DNAString: Standard checksum function? by Henrik Bengtsson ★ 2.4k

For completeness: SEGUID v2 (https://www.seguid.org/), implemented in CRAN package **[seguid](https://cran.r-project.org/package=seguid)*…

Votes

Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-

Handling multiple differential expression comparisons

Answer: fgsea significant result

package goseq seems to be not available on the latest version of R

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Scholar to ATpoint ★ 4.1k