Showing : timepoints • reset
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DeSeq2 with 2 conditions and 3 time points
deseq2 timepoints
updated 4.7 years ago by ★ 1.4k • written 4.7 years ago by • 0
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DEseq2 for analysis of time points
DESeq2 timepoints
updated 4.9 years ago by ★ 4.0k • written 4.9 years ago by ▴ 30
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Answer: Bulk RNAseq analysis for by Gordon Smyth 53k
All three packages allow paired comparisons, where the clone is the "pair". limma moreover allows mixed models (just run `voomLmFit` with `…
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In my experience, the within-clone variability of differentiated stem cells is often as large or larger than the between-clone variability,…
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Comment: Are transformed values from rlog /vst log2 normalized counts?
Are transformed values from rlog /vst log2 normalized counts?
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