Bioconductor Tpp

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447

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TPP

updated 7 months ago by James W. MacDonald 68k • written 7 months ago by flowreen.shikwana • 0

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560

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TPP

updated 13 months ago by James W. MacDonald 68k • written 13 months ago by Alexandre Mahé • 0

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1.1k

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TPP NPARC

updated 4.9 years ago by nils.kurzawa ▴ 20 • written 4.9 years ago by yangwanqi • 0

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710

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TPP

updated 5.6 years ago by Gordon Smyth 53k • written 5.6 years ago by esmaeil.dehghan • 0

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923

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software error TPP

updated 6.7 years ago by shepherl 4.2k • written 6.7 years ago by kkim369 • 0

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3.3k

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TPP

8.1 years ago Bioinformatics ▴ 30

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1.6k

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TPP

updated 8.1 years ago by Pariksheet Nanda ▴ 120 • written 8.1 years ago by Nemo ▴ 80

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1.4k

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TPP

updated 9.0 years ago by dchilds ▴ 40 • written 9.0 years ago by Bioinformatics ▴ 30

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1.5k

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tpp

updated 9.0 years ago by dchilds ▴ 40 • written 9.0 years ago by Bioinformatics ▴ 30

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1.4k

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TPP

updated 9.3 years ago by Martin Morgan 25k • written 9.3 years ago by Bioinformatics ▴ 30

10 results • Page 1 of 1

Recent ...

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Comment: Help with defining groups by Phinney, Brett ▴ 10

I got it working , thank you!!!

Comment: Check removeBatchEffect effectiveness by massimo • 0

I would kindly ask for additional support. When not including the design_timepoint argument in removeBatchEffect and thus keeping the inter…

Comment: Error Loading Experiment from SimBenchData Package by ksankaran • 0

Aha, that was it! The object was class Seurat, but I didn't have it installed. After installing, everything works as expected.

Comment: Streamlining the computing time for MiloDE p-value correction in large dataset? by ATpoint ★ 5.0k

Is a method that is so computationally expensive really beneficial and necessary? You seem to have biological replication, don't you, so ps…

Answer: NA values for DESeq2 p-values and adjusted p-values using large sample sizes by ATpoint ★ 5.0k

Outliers without replacement, independent filtering or all-zero counts for that gene. That's the three options that trigger NAs https://bio…

Votes

Comment: Check removeBatchEffect effectiveness

Gene expression associated with continuous (quantitative) traits (Limma/edgeR/correlation)

Answer: Error Loading Experiment from SimBenchData Package

Comment: incomplete imputation of missing values with LEA impute() function

Answer: Expected memory usage for analyzing large single-cell seq datasets (> 450,000 ce

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