Bioconductor Tsne

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deseq2 rnaseq pca tsne

updated 7.4 years ago by Kushal K Dey ▴ 10 • written 7.4 years ago by s.w.vanderlaan ▴ 30

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Answer: UniProt.ws query loading indefinitely by James W. MacDonald 67k

It should be almost instantaneous. Do you have internet access on the local computer? ``` > system.time(up <- UniProt.ws()) user s…

Comment: Package needs internet access by James W. MacDonald 67k

I am not sure what you mean by 'only used to create that genome file'. What's happening is you are converting the `seqlevels` of an existin…

Comment: Identifying potentially associated gene set to drug response using GSVA by wtao7767 • 0

https://sprunki.net/ Incredibox Sprunki is a creative mod of the classic Incredibox game, blending Sprunki's unique style with interactive …

Answer: Allele frequencies for ALL alleles of one SNP ? by Abiologist • 0

I've discovered that rsnps::ncbi_snp_query(snp_id) does actually give this information - at the bottom of the result$maf_population table. …

Answer: Identifying potentially associated gene set to drug response using GSVA by Robert Castelo ★ 3.4k

Hi, if you want to do some formal inference about the effect of a drug at RNA level, then I would recommend you doing a differential expres…

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Answer: Package needs internet access

Dotplot from enricher outputting very few genes

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Scholar to James W. MacDonald 67k