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vanillaice
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Where is 'constructOligoSetFrom' or 'constructOligoSetListFrom' function?
crlmm
vanillaice
9.6 years ago
Shi, Tao
▴ 720
0
votes
4
replies
1.6k
views
Trouble following the first 5 lines of vanillaICE tutorial?
SNP6
crlmm
vanillaice
vanillaice crlmm
cnv
updated 9.7 years ago by
rscharpf
• 0 • written 9.7 years ago by
cafelumiere12
▴ 20
0
votes
0
replies
1.2k
views
Copy number analysis
SNP
affy
VanillaICE
SNP
affy
VanillaICE
12.9 years ago
Rob Scharpf
▴ 250
0
votes
2
replies
1.3k
views
VanillaICE
Proteomics
VanillaICE
Proteomics
VanillaICE
updated 13.3 years ago by
Valerie Obenchain
★ 6.8k • written 13.3 years ago by
Francesco Mancuso
▴ 110
0
votes
0
replies
1.2k
views
Annotation for Mouse Affy SNP arrays (MOUSEDIVm520650)?
Annotation
Cancer
VanillaICE
crlmm
Annotation
Cancer
VanillaICE
crlmm
13.4 years ago
Daniel Rico
▴ 110
0
votes
0
replies
1.5k
views
Question about using oligo and SNPchip for copy number analysis
SNP
Cancer
graph
oligo
SNPchip
oligoClasses
VanillaICE
crlmm
SNP
Cancer
graph
oligo
15.8 years ago
Min-Han Tan
▴ 40
0
votes
4
replies
1.7k
views
Creating a new instance of oligoSnpSet
Annotation
Cancer
Breast
VanillaICE
copynumber
Annotation
Cancer
Breast
VanillaICE
16.2 years ago
Steven McKinney
▴ 310
7 results • Page
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Comment: For some reason I can't update BiocManager to 3.20
by
shepherl
4.1k
interesting. it could be since this is not your installation that it was installed by an admin that you do not have access to perform this…
Comment: Overcoming confounding in batch effect correction
by
ATpoint
★ 4.6k
Hi, this is not related to Bioconductor directly. And no, you cannot correct anything because in your own batch you only have a single samp…
Comment: MEDIPS - error using MEDIPS.CpGenrich
by
sg
• 0
I have the same error when I use 22 chrs with the paramenters chr.select: Error in h(simpleError(msg, call)) : error in evaluating the …
Comment: Overcoming confounding in batch effect correction
by
mimi
• 0
https://www.bioconductor.org/packages/release/BiocViews.html#___BiologicalQuestion
Comment: GSVA on RNAseq data
by
Robert Castelo
★ 3.4k
Hi Bob, I have not investigated whether a particular unit of expression works better than others, but using logTPM or logCPM units of expr…
Votes
Overcoming confounding in batch effect correction
Answer: Standardization of rlog transformed counts before PCA
Answer: Standardization of rlog transformed counts before PCA
Answer: Standardization of rlog transformed counts before PCA
Answer: Standardization of rlog transformed counts before PCA
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