Bioconductor Venndiagram

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Venndiagram files text

3.0 years ago ratto • 0

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venndiagram

7.1 years ago salamandra ▴ 20

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Limma venndiagram r

updated 4.0 years ago by luca.soldini • 0 • written 7.4 years ago by bajwa.m • 0

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venn diagram venndiagram limma microarray differential expression

updated 7.5 years ago by James W. MacDonald 68k • written 7.5 years ago by A ▴ 60

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VennDiagram venn diagram circle size draw.triple.venn

updated 9.0 years ago by James W. MacDonald 68k • written 9.0 years ago by Gary ▴ 20

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Answer: Guitar R package requires update due to dependency GenomicFeatures by Kevin Blighe ★ 4.0k

Greetings, This issue is indeed caused by recent changes in the Bioconductor 3.20+ release cycle. The function makeTxDbFromGFF() was previ…

Answer: ATACseq rudimentary questions by Kevin Blighe ★ 4.0k

For differential analysis tools like DiffTF and TOBIAS, the standard and statistically sound approach is to create **one large consensus pe…

Answer: Clarification on counting in Rsubread (featureCounts) by Kevin Blighe ★ 4.0k

Dear Luca, This is a very plausible behavior caused by **read assignment ambiguity** due to **overlapping gene coordinates** (specifical…

Answer: How to install packages such as TCGAbiolinks, SumarizedExperiment? by Gordon Smyth 53k

The warning message is telling you that you already have the packages installed. However, you might consider upgrading to the current vers…

Comment: Guitar R package requires update due to dependency GenomicFeatures by Frank • 0

Created by French developer Julien "Orteil" Thiennot, Cookie Clicker transformed the gaming landscape by introducing a new genre of idle ga…

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Answer: DecideTest vs topTAGs in edgeR

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Answer: Limma-voom sample weights and impact on DEG numbers

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Teacher to Gordon Smyth 53k