Bioconductor Versions

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Versions Update BindingSiteFinder

updated 3.0 years ago by Mike Smith ★ 6.6k • written 3.0 years ago by M.Klostermann • 0

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DiffBind Bioconda Versions

4.3 years ago • updated 4.2 years ago Riba Michela ▴ 90

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versions BiocVersion dependencies

updated 4.8 years ago by shepherl 4.2k • written 4.8 years ago by sohitmiglani • 0

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reproducibility versions installing base-r

updated 5.8 years ago by Mike Smith ★ 6.6k • written 5.8 years ago by Yannick Wurm ▴ 40

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Comment: How to do differential expresion across time serise with edgeR? by Gordon Smyth 53k

If you have fake replicates, then I think my code answers your question about how to run the edgeR time-course analysis. Regarding tutoria…

Comment: How to do differential expresion across time serise with edgeR? by petergrahamclark ▴ 10

The use case is kinetic model parameterisation. I'm actually a systems biologist not a bioinformatician. (which is why I'm struggling here)…

Comment: Opportunity to host EuroBioC2026 Preconference workshops! by TikTsokaasocissalpc • 0

Just like attending workshops helps you improve skills in a field, playing 8 Ball Pool helps sharpen your strategy and precision. You can d…

Comment: Upcoming Ensembl API and data access changes - new blog post available by TikTsokaasocissalpc • 0

Thanks for sharing this update. Clear migration timelines and documentation are essential for learners and researchers alike. In healthcare…

Comment: ATACseq rudimentary questions by 4747 • 0

Thank you so much for being detailed, all makes sense now

Votes

Answer: How to install packages such as TCGAbiolinks, SumarizedExperiment?

A: limma-voom duplicateCorrelation once or twice, difference?

A: limma: comparison of repeat measurements - blocking or within-subject correlatio

Answer: DecideTest vs topTAGs in edgeR

A: LIMMA time series spline model.matrix design setup

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