Bioconductor Vranges

Showing : vranges • reset

votes

replies

1.1k

views

somaticsignatures vranges readvcfasvranges

7.3 years ago guillaume.dachy • 0

votes

replies

2.4k

views

variantannotation vcf readvcf vranges

updated 7.4 years ago by Michael Lawrence ★ 11k • written 7.4 years ago by david.mas • 0

votes

replies

1.7k

views

variantannotation VRanges R Rle

updated 7.5 years ago by Valerie Obenchain ★ 6.8k • written 7.5 years ago by Jayendra Shinde • 0

vote

replies

2.2k

views

somaticsignatures somaticsignatures package readvcfasvranges vranges

8.4 years ago • updated 8.3 years ago guillaume.dachy • 0

votes

replies

1.8k

views

vranges vcf to vranges

8.9 years ago Bogdan ▴ 670

vote

replies

2.4k

views

somaticsignatures vranges

updated 9.5 years ago by Julian Gehring ★ 1.3k • written 9.5 years ago by arsala521 ▴ 10

vote

replies

2.0k

views

granges vranges readvcfasvranges somaticsignatures

updated 9.7 years ago by Michael Lawrence ★ 11k • written 9.7 years ago by jpluta26 • 0

votes

replies

2.8k

views

SomaticSignatures mutationContext VRanges

updated 10.3 years ago by Julian Gehring ★ 1.3k • written 10.3 years ago by tesa.severson ▴ 10

votes

replies

3.0k

views

variantannotation vranges readvcf readvcfasvranges metadata

10.8 years ago summerela • 0

votes

replies

4.0k

views

variantannotation granges DNAStringSetList findoverlaps Vranges

10.8 years ago summerela • 0

10 results • Page 1 of 1

Recent ...

Replies

Comment: Bioinformatician at the Lausanne University Hospital by eja.ger.m • 0

For individuals looking to improve communication and collaboration in demanding medical or research environments like the Genetic Medicine …

Comment: Question about RE-agnostic mode for intact Hi-C and Micro-C normalization(HiCDCP by TikTsoksocissalpc • 0

Normalizing complex datasets like Hi C can be challenging, much like setting up a PC for optimal gaming performance. Just as careful tuning…

Comment: p.adjust BH Question by TikTsoksocissalpc • 0

Thanks for sharing your question about RMA limma analysis While working on your experiment, it s always helpful to have some background mu…

Answer: NUPOP usage by shepherl 4.2k

You should read the documentation in the package especially the package vignette https://bioconductor.org/packages/release/bioc/html/NuPoP.…

Comment: How can I correctly use phyloseq with Docker? by fnfgame • 0

In a rocker image, this error usually means the Bioconductor install happened as root but the runtime library paths used by the shiny user …

Votes

C: DESeq2 Following RSEM

Upcoming Ensembl API and data access changes - new blog post available

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Answer: Large logFC but somewhat high FDR

Comment: upstream git branches of bioc-release

Awards • All

Popular Question to James W. MacDonald 68k