Bioconductor Vranges

Showing : vranges • reset

votes

replies

1.1k

views

somaticsignatures vranges readvcfasvranges

7.4 years ago guillaume.dachy • 0

votes

replies

2.4k

views

variantannotation vcf readvcf vranges

updated 7.5 years ago by Michael Lawrence ★ 11k • written 7.5 years ago by david.mas • 0

votes

replies

1.7k

views

variantannotation VRanges R Rle

updated 7.6 years ago by Valerie Obenchain ★ 6.8k • written 7.6 years ago by Jayendra Shinde • 0

vote

replies

2.2k

views

somaticsignatures somaticsignatures package readvcfasvranges vranges

8.4 years ago • updated 8.3 years ago guillaume.dachy • 0

votes

replies

1.8k

views

vranges vcf to vranges

9.0 years ago Bogdan ▴ 670

vote

replies

2.4k

views

somaticsignatures vranges

updated 9.6 years ago by Julian Gehring ★ 1.3k • written 9.6 years ago by arsala521 ▴ 10

vote

replies

2.0k

views

granges vranges readvcfasvranges somaticsignatures

updated 9.8 years ago by Michael Lawrence ★ 11k • written 9.8 years ago by jpluta26 • 0

votes

replies

2.8k

views

SomaticSignatures mutationContext VRanges

updated 10.4 years ago by Julian Gehring ★ 1.3k • written 10.4 years ago by tesa.severson ▴ 10

votes

replies

3.1k

views

variantannotation vranges readvcf readvcfasvranges metadata

10.9 years ago summerela • 0

votes

replies

4.1k

views

variantannotation granges DNAStringSetList findoverlaps Vranges

10.9 years ago summerela • 0

10 results • Page 1 of 1

Recent ...

Replies

Comment: Incosistencies in buildSNNGraph() function by ATpoint ★ 5.0k

Just played with this a bit and I think it comes down to not having a fixed seed before running the leiden thingy. Same goes for PCA and UM…

Answer: Incosistencies in buildSNNGraph() function by Aaron Lun ★ 29k

The most obvious thing that comes to mind is the RNG seed. `cluster_leiden()` does some random number generation, somewhere deep in the **i…

Comment: Opportunity to host EuroBioC2026 Preconference workshops! by TikTsokaas33ocissalpc • 0

Thank you for sharing the EuroBioC2026 workshop opportunity. I m interested in hosting a hands on session teaching reproducible data analys…

Comment: Ensembl plants at annotationHub? by jwp48 • 0

Nope I don't mind haha! Anyway thanks so much! Thats super kind of you!

Answer: Combining two proteomics datasets with limpa by Gordon Smyth 53k

Hi Andrew, We don't have that much experience combining different datasets with limpa yet, but my feeling is that the same DPC should be u…

Votes

Answer: Incosistencies in buildSNNGraph() function

Answer: Where do the filename come from in the LOLA datasets?

Bioconductor Maintainer Application

A: What is logFC and "B" in methylation analysis ??

limma moderated t-statistics and B-statistics

Awards • All

Popular Question to Lluís Revilla Sancho ▴ 760