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Where is 'constructOligoSetFrom' or 'constructOligoSetListFrom' function?
crlmm vanillaice
10.6 years ago Shi, Tao ▴ 720
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Answer: A: Where is 'constructOligoSetFrom' or 'constructOligoSetListFrom' function?
10.6 years ago Shi, Tao ▴ 720
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Comment: C: reading .idat files using genotype.Illumina in crlmm
10.7 years ago Shi, Tao ▴ 720
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2
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reading .idat files using genotype.Illumina in crlmm
crlmm idat
updated 10.7 years ago by ▴ 1000 • written 10.7 years ago by ▴ 720
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Comment: C: Results changed after DESeq2 upgrade
11.0 years ago Shi, Tao ▴ 720
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2
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Results changed after DESeq2 upgrade
deseq2
updated 11.0 years ago by 43k • written 11.0 years ago by ▴ 720
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Answer: A: comisc in biomart
11.1 years ago Shi, Tao ▴ 720
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comisc in biomart
biomaRt
11.1 years ago Shi, Tao ▴ 720
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Answer: A: strange log2FoldChange estimates
11.5 years ago Shi, Tao ▴ 720
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1
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1.8k
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strange log2FoldChange estimates
RNASeq DOSE DESeq2 RNASeq DOSE DESeq2
11.5 years ago Shi, Tao ▴ 720
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Comment: C: multiple comparison adjustment of p values in LIMMA
12.4 years ago Shi, Tao ▴ 720
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4
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multiple comparison adjustment of p values in LIMMA
limma limma
updated 12.4 years ago by 53k • written 12.4 years ago by ▴ 720
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Comment: C: multiple comparison adjustment of p values in LIMMA
12.4 years ago Shi, Tao ▴ 720
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Comment: C: limma: NA coefficients due to missing values
12.8 years ago Shi, Tao ▴ 720
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2
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limma: NA coefficients due to missing values
limma limma
updated 12.8 years ago by 53k • written 12.8 years ago by ▴ 720
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2
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1.3k
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arrayQualityMetrics: huge object size!?
updated 14.0 years ago by ★ 13k • written 14.0 years ago by ▴ 720
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1.3k
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Comment: C: arrayQualityMetrics: huge object size!?
14.0 years ago Shi, Tao ▴ 720
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1.2k
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Fw: a bug in heatmap.plus?
14.7 years ago Shi, Tao ▴ 720
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880
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Answer: A: mapping a gene id to determine if it's ribosomal
14.8 years ago Shi, Tao ▴ 720
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900
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getSequence ensmebl biomaRt
biomaRt biomaRt
14.8 years ago Shi, Tao ▴ 720
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1.6k
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Comment: C: desktop workstation configuration
15.2 years ago Shi, Tao ▴ 720
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desktop workstation configuration
updated 15.2 years ago by ★ 1.7k • written 15.2 years ago by ▴ 720
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Comment: C: question on "uniCox"
15.2 years ago Shi, Tao ▴ 720
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question on "uniCox"
updated 15.2 years ago by 6.7k • written 15.2 years ago by ▴ 720
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2
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Cy5: methylated or unmethylated?
methylumi methylumi
updated 15.4 years ago by 21k • written 15.4 years ago by ▴ 720
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Comment: C: Cy5: methylated or unmethylated?
15.4 years ago Shi, Tao ▴ 720
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Comment: C: Simulation of the beta average
15.4 years ago Shi, Tao ▴ 720
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Comment: C: DNA-Methylation, CopyNumber Results
15.4 years ago Shi, Tao ▴ 720
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Comment: C: DNA-Methylation, CopyNumber Results
15.4 years ago Shi, Tao ▴ 720
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2.5k
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Comment: C: DNA-Methylation, CopyNumber Results
15.4 years ago Shi, Tao ▴ 720
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Answer: A: HTqPCR
15.5 years ago Shi, Tao ▴ 720
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illumina Infinium HumanMethylation27 detection-p-value
updated 15.5 years ago by ★ 1.2k • written 15.5 years ago by ▴ 720
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Comment: C: illumina Infinium HumanMethylation27 detection-p-value
15.5 years ago Shi, Tao ▴ 720
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3
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problems when using "readCcg" in "affxparser" to parse .CNCHP file
affy affy
updated 16.0 years ago by ★ 3.9k • written 16.1 years ago by ▴ 720
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Comment: C: problems when using "readCcg" in "affxparser" to parse .CNCHP file
16.0 years ago Shi, Tao ▴ 720
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2
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biomaRt doesn't load RCurl automatically
SNP biomaRt SNP biomaRt
17.3 years ago Shi, Tao ▴ 720
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1.6k
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Answer: A: biomaRt doesn't load RCurl automatically
17.3 years ago Shi, Tao ▴ 720
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Answer: A: biomaRt get exon intron structure of a transcrit
17.3 years ago Shi, Tao ▴ 720
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4
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2.8k
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biomaRt get exon intron structure of a transcrit
Cancer biomaRt Cancer biomaRt
17.3 years ago Shi, Tao ▴ 720
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1
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2.8k
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Answer: A: biomaRt get exon intron structure of a transcrit
17.3 years ago Shi, Tao ▴ 720
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0
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1.3k
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Answer: A: gene count in a GO term
17.4 years ago Shi, Tao ▴ 720
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3
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1.3k
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gene count in a GO term
affy affy
17.4 years ago Shi, Tao ▴ 720
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0
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1.3k
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Answer: A: "start" filter in biomaRt
17.5 years ago Shi, Tao ▴ 720
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2
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1.3k
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"start" filter in biomaRt
17.5 years ago Shi, Tao ▴ 720
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1.0k
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GOTERM in GO.db returns NULL
GO GO
updated 17.5 years ago by ★ 7.2k • written 17.5 years ago by ▴ 720
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2
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2.2k
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biomaRt:getBM error when query is large
GO GO
17.5 years ago Shi, Tao ▴ 720
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2.2k
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Answer: A: biomaRt:getBM error when query is large
17.5 years ago Shi, Tao ▴ 720
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2
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create Affymetrix .chp file for viewing in affy Integrated Genome Browser
affy affxparser affy affxparser
17.8 years ago Shi, Tao ▴ 720
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0
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1.9k
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Answer: A: create Affymetrix .chp file for viewing in affy Integrated Genome Browser
17.8 years ago Shi, Tao ▴ 720
0
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1
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1.3k
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create Affymetrix .chp file for viewing in affy Integrated Genome Browser
affy affy
updated 17.8 years ago by ★ 6.5k • written 17.8 years ago by ▴ 720
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