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Where is 'constructOligoSetFrom' or 'constructOligoSetListFrom' function?
crlmm vanillaice
9.5 years ago Shi, Tao ▴ 720
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Answer: A: Where is 'constructOligoSetFrom' or 'constructOligoSetListFrom' function?
9.5 years ago Shi, Tao ▴ 720
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Comment: C: reading .idat files using genotype.Illumina in crlmm
9.5 years ago Shi, Tao ▴ 720
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2
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reading .idat files using genotype.Illumina in crlmm
crlmm idat
updated 9.5 years ago by ▴ 1000 • written 9.5 years ago by ▴ 720
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1.2k
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Comment: C: Results changed after DESeq2 upgrade
9.8 years ago Shi, Tao ▴ 720
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2
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Results changed after DESeq2 upgrade
deseq2
updated 9.8 years ago by 43k • written 9.8 years ago by ▴ 720
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comisc in biomart
biomaRt
9.9 years ago Shi, Tao ▴ 720
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1.5k
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Answer: A: comisc in biomart
9.9 years ago Shi, Tao ▴ 720
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Answer: A: strange log2FoldChange estimates
10.3 years ago Shi, Tao ▴ 720
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1
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1.5k
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strange log2FoldChange estimates
RNASeq DOSE DESeq2 RNASeq DOSE DESeq2
10.3 years ago Shi, Tao ▴ 720
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Comment: C: multiple comparison adjustment of p values in LIMMA
11.2 years ago Shi, Tao ▴ 720
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4
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multiple comparison adjustment of p values in LIMMA
limma limma
updated 11.2 years ago by 52k • written 11.2 years ago by ▴ 720
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1
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1.9k
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Comment: C: multiple comparison adjustment of p values in LIMMA
11.2 years ago Shi, Tao ▴ 720
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Comment: C: limma: NA coefficients due to missing values
11.6 years ago Shi, Tao ▴ 720
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2
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limma: NA coefficients due to missing values
limma limma
updated 11.6 years ago by 52k • written 11.6 years ago by ▴ 720
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2
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1.1k
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arrayQualityMetrics: huge object size!?
updated 12.8 years ago by ★ 13k • written 12.8 years ago by ▴ 720
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1.1k
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Comment: C: arrayQualityMetrics: huge object size!?
12.8 years ago Shi, Tao ▴ 720
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1.0k
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Fw: a bug in heatmap.plus?
13.5 years ago Shi, Tao ▴ 720
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0
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735
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Answer: A: mapping a gene id to determine if it's ribosomal
13.6 years ago Shi, Tao ▴ 720
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0
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792
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getSequence ensmebl biomaRt
biomaRt biomaRt
13.6 years ago Shi, Tao ▴ 720
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0
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1.4k
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Comment: C: desktop workstation configuration
14.0 years ago Shi, Tao ▴ 720
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3
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1.4k
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desktop workstation configuration
updated 14.0 years ago by ★ 1.7k • written 14.0 years ago by ▴ 720
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Comment: C: question on "uniCox"
14.1 years ago Shi, Tao ▴ 720
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2
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1.5k
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question on "uniCox"
updated 14.1 years ago by 6.7k • written 14.1 years ago by ▴ 720
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2
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1.4k
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Cy5: methylated or unmethylated?
methylumi methylumi
updated 14.2 years ago by 21k • written 14.2 years ago by ▴ 720
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Comment: C: Cy5: methylated or unmethylated?
14.2 years ago Shi, Tao ▴ 720
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Comment: C: Simulation of the beta average
14.2 years ago Shi, Tao ▴ 720
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Comment: C: DNA-Methylation, CopyNumber Results
14.3 years ago Shi, Tao ▴ 720
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2.0k
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Comment: C: DNA-Methylation, CopyNumber Results
14.3 years ago Shi, Tao ▴ 720
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2.0k
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Comment: C: DNA-Methylation, CopyNumber Results
14.3 years ago Shi, Tao ▴ 720
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762
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Answer: A: HTqPCR
14.3 years ago Shi, Tao ▴ 720
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9
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2.4k
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illumina Infinium HumanMethylation27 detection-p-value
updated 14.3 years ago by ★ 1.2k • written 14.3 years ago by ▴ 720
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Comment: C: illumina Infinium HumanMethylation27 detection-p-value
14.3 years ago Shi, Tao ▴ 720
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3
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1.1k
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problems when using "readCcg" in "affxparser" to parse .CNCHP file
affy affy
updated 14.9 years ago by ★ 3.9k • written 14.9 years ago by ▴ 720
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Comment: C: problems when using "readCcg" in "affxparser" to parse .CNCHP file
14.9 years ago Shi, Tao ▴ 720
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2
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biomaRt doesn't load RCurl automatically
SNP biomaRt SNP biomaRt
16.1 years ago Shi, Tao ▴ 720
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Answer: A: biomaRt doesn't load RCurl automatically
16.1 years ago Shi, Tao ▴ 720
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4
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2.4k
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biomaRt get exon intron structure of a transcrit
Cancer biomaRt Cancer biomaRt
16.1 years ago Shi, Tao ▴ 720
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Answer: A: biomaRt get exon intron structure of a transcrit
16.1 years ago Shi, Tao ▴ 720
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2.4k
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Answer: A: biomaRt get exon intron structure of a transcrit
16.1 years ago Shi, Tao ▴ 720
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3
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981
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gene count in a GO term
affy affy
16.2 years ago Shi, Tao ▴ 720
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0
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981
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Answer: A: gene count in a GO term
16.2 years ago Shi, Tao ▴ 720
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0
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1.1k
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Answer: A: "start" filter in biomaRt
16.3 years ago Shi, Tao ▴ 720
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2
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1.1k
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"start" filter in biomaRt
16.3 years ago Shi, Tao ▴ 720
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1
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888
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GOTERM in GO.db returns NULL
GO GO
updated 16.4 years ago by ★ 7.2k • written 16.4 years ago by ▴ 720
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2
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1.8k
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biomaRt:getBM error when query is large
GO GO
16.4 years ago Shi, Tao ▴ 720
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1.8k
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Answer: A: biomaRt:getBM error when query is large
16.4 years ago Shi, Tao ▴ 720
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2
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create Affymetrix .chp file for viewing in affy Integrated Genome Browser
affy affxparser affy affxparser
16.6 years ago Shi, Tao ▴ 720
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0
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1.6k
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Answer: A: create Affymetrix .chp file for viewing in affy Integrated Genome Browser
16.6 years ago Shi, Tao ▴ 720
0
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1
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1.1k
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create Affymetrix .chp file for viewing in affy Integrated Genome Browser
affy affy
updated 16.6 years ago by ★ 6.5k • written 16.6 years ago by ▴ 720
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