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Obtain Protein-Protein Interaction (PPI) table from a list of Gene IDs in R or Python.
Protein Protein Interaction Gene List BioGRID PICKLE R Programming
3.8 years ago omarrafiqued ▴ 50
0
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1
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1.9k
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Comment: C: Compare ranges from two GRanges and check if the ranges from the first GRanges i
3.9 years ago omarrafiqued ▴ 50
0
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1
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1.9k
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Comment: C: Compare ranges from two GRanges and check if the ranges from the first GRanges i
3.9 years ago omarrafiqued ▴ 50
0
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0
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1.9k
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Comment: C: Compare ranges from two GRanges and check if the ranges from the first GRanges i
3.9 years ago omarrafiqued ▴ 50
0
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1
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1.9k
views
Comment: C: Compare ranges from two GRanges and check if the ranges from the first GRanges i
3.9 years ago omarrafiqued ▴ 50
8
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10
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1.9k
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Compare ranges from two GRanges and check if the ranges from the first GRanges is contained in another.
GRanges IRanges
updated 3.9 years ago by 65k • written 3.9 years ago by ▴ 50
2
votes
1
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1.4k
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Level 3 TCGA tumor samples
TGCA
updated 4.1 years ago by ★ 3.9k • written 4.1 years ago by ▴ 50
0
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0
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520
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Plot seperate Schoenfeld plots for different clusters/subtypes
R survival analysis
4.2 years ago omarrafiqued ▴ 50
0
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0
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5.0k
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Comment: C: Finding enriched pathways from a gene list.
4.2 years ago omarrafiqued ▴ 50
3
votes
1
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1.2k
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Query relating pathway enrichment analysis for DEGs using KEGG or any other database.
KEGG R offline Pathway Enrichment
updated 4.2 years ago by 50k • written 4.6 years ago by ▴ 50
6
votes
6
replies
5.0k
views
Finding enriched pathways from a gene list.
microarray limma kegg ENTREZ enrichment analysis
updated 4.2 years ago by 50k • written 4.2 years ago by ▴ 50
0
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0
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5.0k
views
Comment: C: Finding enriched pathways from a gene list.
4.2 years ago omarrafiqued ▴ 50
9
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10
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1.4k
views
Mapping of GENE symbols into ENTREZ
limma annotation Gene
4.6 years ago • updated 4.2 years ago omarrafiqued ▴ 50
0
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1
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5.0k
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Comment: C: Finding enriched pathways from a gene list.
4.2 years ago omarrafiqued ▴ 50
0
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0
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935
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Comment: C: Library for Node Influence package
4.4 years ago omarrafiqued ▴ 50
1
vote
2
replies
935
views
Library for Node Influence package
Graph gene regulatory network node influence gene ranking
updated 4.4 years ago by ★ 3.9k • written 4.4 years ago by ▴ 50
1
vote
1
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822
views
Querying CTD database to find diseases associated with the given pathways.
CTD Database disease pathway association R programming
4.6 years ago omarrafiqued ▴ 50
0
votes
0
replies
961
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Modifying a Pathview function which needs an internet connection so that it can work without an internet connection.
Pathview Gene Mapping KEGG
4.6 years ago omarrafiqued ▴ 50
0
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0
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1.4k
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Comment: C: Mapping of GENE symbols into ENTREZ
4.6 years ago omarrafiqued ▴ 50
1
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0
replies
1.4k
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Comment: C: Mapping of GENE symbols into ENTREZ
4.6 years ago omarrafiqued ▴ 50
1
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1
reply
1.4k
views
Comment: C: Mapping of GENE symbols into ENTREZ
4.6 years ago omarrafiqued ▴ 50
1
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1
reply
1.4k
views
Comment: C: Mapping of GENE symbols into ENTREZ
4.6 years ago omarrafiqued ▴ 50
1
vote
1
reply
1.4k
views
Comment: C: Mapping of GENE symbols into ENTREZ
4.6 years ago omarrafiqued ▴ 50
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