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Obtain Protein-Protein Interaction (PPI) table from a list of Gene IDs in R or Python.
Protein Protein Interaction Gene List BioGRID PICKLE R Programming
4.5 years ago omarrafiqued ▴ 50
0
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1
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2.5k
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Comment: C: Compare ranges from two GRanges and check if the ranges from the first GRanges i
4.5 years ago omarrafiqued ▴ 50
0
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1
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2.5k
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Comment: C: Compare ranges from two GRanges and check if the ranges from the first GRanges i
4.5 years ago omarrafiqued ▴ 50
0
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0
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2.5k
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Comment: C: Compare ranges from two GRanges and check if the ranges from the first GRanges i
4.5 years ago omarrafiqued ▴ 50
0
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1
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2.5k
views
Comment: C: Compare ranges from two GRanges and check if the ranges from the first GRanges i
4.5 years ago omarrafiqued ▴ 50
8
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10
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2.5k
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Compare ranges from two GRanges and check if the ranges from the first GRanges is contained in another.
GRanges IRanges
updated 4.5 years ago by 67k • written 4.5 years ago by ▴ 50
2
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1
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1.8k
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Level 3 TCGA tumor samples
TGCA
updated 4.8 years ago by ★ 4.0k • written 4.8 years ago by ▴ 50
0
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0
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660
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Plot seperate Schoenfeld plots for different clusters/subtypes
R survival analysis
4.8 years ago omarrafiqued ▴ 50
0
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0
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5.6k
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Comment: C: Finding enriched pathways from a gene list.
4.8 years ago omarrafiqued ▴ 50
3
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1
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1.4k
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Query relating pathway enrichment analysis for DEGs using KEGG or any other database.
KEGG R offline Pathway Enrichment
updated 4.8 years ago by 52k • written 5.2 years ago by ▴ 50
6
votes
6
replies
5.6k
views
Finding enriched pathways from a gene list.
microarray limma kegg ENTREZ enrichment analysis
updated 4.8 years ago by 52k • written 4.8 years ago by ▴ 50
0
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0
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5.6k
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Comment: C: Finding enriched pathways from a gene list.
4.8 years ago omarrafiqued ▴ 50
9
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10
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1.8k
views
Mapping of GENE symbols into ENTREZ
limma annotation Gene
5.3 years ago • updated 4.8 years ago omarrafiqued ▴ 50
0
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1
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5.6k
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Comment: C: Finding enriched pathways from a gene list.
4.8 years ago omarrafiqued ▴ 50
0
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0
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1.1k
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Comment: C: Library for Node Influence package
5.0 years ago omarrafiqued ▴ 50
1
vote
2
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1.1k
views
Library for Node Influence package
Graph gene regulatory network node influence gene ranking
updated 5.0 years ago by ★ 4.0k • written 5.0 years ago by ▴ 50
1
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1
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1.0k
views
Querying CTD database to find diseases associated with the given pathways.
CTD Database disease pathway association R programming
5.2 years ago omarrafiqued ▴ 50
0
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0
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1.1k
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Modifying a Pathview function which needs an internet connection so that it can work without an internet connection.
Pathview Gene Mapping KEGG
5.3 years ago omarrafiqued ▴ 50
0
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0
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1.8k
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Comment: C: Mapping of GENE symbols into ENTREZ
5.3 years ago omarrafiqued ▴ 50
1
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0
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1.8k
views
Comment: C: Mapping of GENE symbols into ENTREZ
5.3 years ago omarrafiqued ▴ 50
1
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1
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1.8k
views
Comment: C: Mapping of GENE symbols into ENTREZ
5.3 years ago omarrafiqued ▴ 50
1
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1
reply
1.8k
views
Comment: C: Mapping of GENE symbols into ENTREZ
5.3 years ago omarrafiqued ▴ 50
1
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1
reply
1.8k
views
Comment: C: Mapping of GENE symbols into ENTREZ
5.3 years ago omarrafiqued ▴ 50
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