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Comment:
Comment: Convert Seurat Object to Summarised Experiment or ExpressionSet
11 days ago
Bine
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827
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Comment:
Comment: Convert Seurat Object to Summarised Experiment or ExpressionSet
11 days ago
Bine
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0
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1
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827
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Comment:
Comment: Convert Seurat Object to Summarised Experiment or ExpressionSet
12 days ago
Bine
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0
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827
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Comment:
Comment: Convert Seurat Object to Summarised Experiment or ExpressionSet
12 days ago
Bine
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0
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1
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827
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Comment:
Comment: Convert Seurat Object to Summarised Experiment or ExpressionSet
12 days ago
Bine
▴ 40
0
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1
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827
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Comment:
Comment: Convert Seurat Object to Summarised Experiment or ExpressionSet
12 days ago
Bine
▴ 40
0
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1
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827
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Comment:
Comment: Convert Seurat Object to Summarised Experiment or ExpressionSet
12 days ago
Bine
▴ 40
0
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1
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827
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Comment:
Comment: Convert Seurat Object to Summarised Experiment or ExpressionSet
12 days ago
Bine
▴ 40
0
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1
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827
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Comment:
Comment: Convert Seurat Object to Summarised Experiment or ExpressionSet
12 days ago
Bine
▴ 40
0
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1
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827
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Comment:
Comment: Convert Seurat Object to Summarised Experiment or ExpressionSet
12 days ago
Bine
▴ 40
0
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1
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827
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Comment:
Comment: Convert Seurat Object to Summarised Experiment or ExpressionSet
12 days ago
Bine
▴ 40
8
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23
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827
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Convert Seurat Object to Summarised Experiment or ExpressionSet
SummarizedExperiment
ExpressionSet
updated 11 days ago by
Robert Castelo
★ 3.3k • written 13 days ago by
Bine
▴ 40
0
votes
0
replies
1.6k
views
Comment:
Comment: JoinLayers function for Seurat Object for annotation with SingleR
4 months ago
Bine
▴ 40
1
vote
4
replies
1.6k
views
JoinLayers function for Seurat Object for annotation with SingleR
SingleR
SeuratscRNA
written 4 months ago by
Bine
▴ 40
0
votes
1
reply
1.2k
views
Comment:
Comment: SingleR annotation of several slots/patients
4 months ago
Bine
▴ 40
0
votes
1
reply
1.2k
views
Comment:
Comment: SingleR annotation of several slots/patients
4 months ago
Bine
▴ 40
2
votes
4
replies
1.2k
views
SingleR annotation of several slots/patients
SingleR
written 4 months ago by
Bine
▴ 40
1
vote
1
reply
333
views
DESeqResults object -> extract statistics results with rownames (gene)
DESeq2
updated 5 months ago by
ATpoint
★ 4.0k • written 5 months ago by
Bine
▴ 40
0
votes
0
replies
753
views
Comment:
Comment: Subsetting Range Summarized Experiment
6 months ago
Bine
▴ 40
0
votes
1
reply
753
views
Comment:
Comment: Subsetting Range Summarized Experiment
6 months ago
Bine
▴ 40
0
votes
1
reply
753
views
Comment:
Comment: Subsetting Range Summarized Experiment
6 months ago
Bine
▴ 40
3
votes
6
replies
753
views
Subsetting Range Summarized Experiment
SummarizedExperiment
6 months ago
Bine
▴ 40
0
votes
1
reply
1.7k
views
Comment:
Comment: Different results between Limma and DESEQ2 for Differential Expression Analysis
19 months ago
Bine
▴ 40
0
votes
1
reply
1.7k
views
Comment:
Comment: Different results between Limma and DESEQ2 for Differential Expression Analysis
19 months ago
Bine
▴ 40
0
votes
1
reply
1.7k
views
Comment:
Comment: Different results between Limma and DESEQ2 for Differential Expression Analysis
19 months ago
Bine
▴ 40
3
votes
7
replies
1.7k
views
Different results between Limma and DESEQ2 for Differential Expression Analysis
DESeq2
limma
updated 19 months ago by
swbarnes2
★ 1.3k • written 19 months ago by
Bine
▴ 40
0
votes
1
reply
999
views
Comment:
Comment: DESEQ2 several samples per individual
19 months ago
Bine
▴ 40
0
votes
1
reply
999
views
Comment:
Comment: DESEQ2 several samples per individual
19 months ago
Bine
▴ 40
3
votes
5
replies
999
views
DESEQ2 several samples per individual
DESeq2
updated 19 months ago by
Michael Love
41k • written 19 months ago by
Bine
▴ 40
0
votes
1
reply
2.5k
views
Comment:
Comment: Print EnhancedVolcano Plot as jpeg or similar in R Notebook
23 months ago
Bine
▴ 40
0
votes
1
reply
2.5k
views
Comment:
Comment: Print EnhancedVolcano Plot as jpeg or similar in R Notebook
23 months ago
Bine
▴ 40
3
votes
5
replies
2.5k
views
Print EnhancedVolcano Plot as jpeg or similar in R Notebook
EnhancedVolcano
updated 23 months ago by
Kevin Blighe
★ 3.9k • written 23 months ago by
Bine
▴ 40
1
vote
1
reply
511
views
Result table pvalue and adjusted p value
DESeq2
updated 2.2 years ago by
Michael Love
41k • written 2.2 years ago by
Bine
▴ 40
0
votes
0
replies
888
views
Comment:
Comment: DESEQ2 Results log2fold and pvalue changes after removing genes
2.4 years ago
Bine
▴ 40
0
votes
0
replies
888
views
Comment:
Comment: DESEQ2 Results log2fold and pvalue changes after removing genes
2.4 years ago
Bine
▴ 40
3
votes
4
replies
888
views
DESEQ2 Results log2fold and pvalue changes after removing genes
DESeq2
2.4 years ago
Bine
▴ 40
0
votes
0
replies
767
views
Comment:
Comment: padjust after running DESEQ2
2.4 years ago
Bine
▴ 40
2
votes
2
replies
767
views
padjust after running DESEQ2
DESeq2
2.4 years ago
Bine
▴ 40
1
vote
1
reply
480
views
Multiple samples per individual
DESeq2
updated 2.5 years ago by
Michael Love
41k • written 2.5 years ago by
Bine
▴ 40
0
votes
1
reply
1.0k
views
Comment:
Comment: Remove genes in a list from cts
2.6 years ago
Bine
▴ 40
2
votes
4
replies
1.0k
views
Remove genes in a list from cts
DESeq2
updated 2.6 years ago by
swbarnes2
★ 1.3k • written 2.6 years ago by
Bine
▴ 40
0
votes
1
reply
1.4k
views
Comment:
Comment: Combining two groups in contrast deseq2
2.6 years ago
Bine
▴ 40
0
votes
1
reply
1.4k
views
Comment:
Comment: Combining two groups in contrast deseq2
2.6 years ago
Bine
▴ 40
1
vote
5
replies
1.4k
views
Combining two groups in contrast deseq2
DESeq2
updated 2.6 years ago by
Michael Love
41k • written 2.6 years ago by
Bine
▴ 40
0
votes
2
replies
2.4k
views
Comment:
Comment: Combat and dds Object
2.7 years ago
Bine
▴ 40
5
votes
8
replies
2.4k
views
Combat and dds Object
DESeq2
combat
updated 14 months ago by
ATpoint
★ 4.0k • written 2.7 years ago by
Bine
▴ 40
0
votes
0
replies
772
views
Comment:
Comment: Problems with pulling specific variables
2.8 years ago
Bine
▴ 40
0
votes
1
reply
772
views
Comment:
Comment: Problems with pulling specific variables
2.8 years ago
Bine
▴ 40
0
votes
4
replies
772
views
Problems with pulling specific variables
DESeq2
2.8 years ago
Bine
▴ 40
0
votes
0
replies
1.8k
views
Comment:
Comment: ColData use only certain variable within
2.9 years ago
Bine
▴ 40
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