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322
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Comment: Comment: limma and Syntactically Invalid Factor Values
3 days ago Dario Strbenac ★ 1.5k
0
votes
1
reply
322
views
Comment: Comment: limma and Syntactically Invalid Factor Values
4 days ago Dario Strbenac ★ 1.5k
1
vote
6
replies
322
views
limma and Syntactically Invalid Factor Values
limma
updated 2 days ago by 51k • written 5 days ago by ★ 1.5k
0
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0
replies
115
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Understanding Differentially Abundant Neighbourhood Identification
miloR
25 days ago Dario Strbenac ★ 1.5k
0
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0
replies
118
views
Structural Variant Format Converted for BRASS Format
StructuralVariantAnnotation
4 weeks ago Dario Strbenac ★ 1.5k
0
votes
0
replies
127
views
Differential Gene Wrapper for Propotion of Detected
scran
4 weeks ago Dario Strbenac ★ 1.5k
1
vote
1
reply
220
views
Dominance Index for Shotgun Metagenomics Data
microbiome
updated 3 months ago by ▴ 40 • written 3 months ago by ★ 1.5k
0
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0
replies
152
views
Exon-exon Junction Analysis for Variable-length Exons
Rsubread
3 months ago Dario Strbenac ★ 1.5k
2
votes
2
replies
360
views
Bluster and Varieties of Louvain Clulstering
bluster
updated 3 months ago by ★ 4.2k • written 3 months ago by ★ 1.5k
2
votes
1
reply
365
views
Existence of Bioconductor versus Seurat Software Ecosystems Quantitative Comparison
scran bluster scater scuttle
updated 4 months ago by ★ 4.2k • written 4 months ago by ★ 1.5k
3
votes
3
replies
651
views
plotUMAP Gene Set Faceted
scater
updated 5 months ago by ▴ 160 • written 5 months ago by ★ 1.5k
0
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0
replies
651
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Comment: Comment: plotUMAP Gene Set Faceted
5 months ago Dario Strbenac ★ 1.5k
1
vote
1
reply
376
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plotUMAP and ggplotly Cell IDs Display
scater
updated 6 months ago by ▴ 160 • written 6 months ago by ★ 1.5k
0
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0
replies
199
views
iSEE Difference Panel Missing
iSEEu
6 months ago Dario Strbenac ★ 1.5k
0
votes
0
replies
233
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clusterSweep Warning k Capped
bluster
6 months ago Dario Strbenac ★ 1.5k
0
votes
0
replies
736
views
Comment: Comment: Merging of Human and Mouse SingleCellExperiment Objects Error
6 months ago Dario Strbenac ★ 1.5k
4
votes
6
replies
736
views
Merging of Human and Mouse SingleCellExperiment Objects Error
SingleCellExperiment
6 months ago Dario Strbenac ★ 1.5k
0
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0
replies
736
views
Comment: Comment: Merging of Human and Mouse SingleCellExperiment Objects Error
6 months ago Dario Strbenac ★ 1.5k
2
votes
1
reply
368
views
DataFrame Printing User Control
S4Vectors
updated 8 months ago by 16k • written 8 months ago by ★ 1.5k
3
votes
1
reply
738
views
read10xCounts for Cell Ranger 7 Output
DropletUtils
updated 8 months ago by ★ 4.2k • written 21 months ago by ★ 1.5k
5
votes
6
replies
764
views
DataFrame Construction With Non-standard Column
S4Vectors
updated 10 months ago by 16k • written 10 months ago by ★ 1.5k
2
votes
2
replies
1.6k
views
Matching Variants Between Two VCF Objects
VariantAnnotation
written 3.7 years ago by ★ 1.5k
0
votes
1
reply
639
views
scRNAseq Download Errors
scRNAseq
updated 15 months ago by 3.9k • written 15 months ago by ★ 1.5k
4
votes
4
replies
1.5k
views
Flank GenomicRanges on Both Sides
GenomicRanges
updated 18 months ago by 66k • written 18 months ago by ★ 1.5k
0
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0
replies
823
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Comment: Comment: Successor of genesBy Defunct Function
18 months ago Dario Strbenac ★ 1.5k
0
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1
reply
1.5k
views
Comment: Comment: Flank GenomicRanges on Both Sides
18 months ago Dario Strbenac ★ 1.5k
2
votes
4
replies
823
views
Successor of genesBy Defunct Function
ensembldb
updated 18 months ago by 16k • written 18 months ago by ★ 1.5k
0
votes
0
replies
832
views
Answer: Answer: Is it possible to convert transcript-level to gene-level dataset to use it in DE
18 months ago Dario Strbenac ★ 1.5k
3
votes
3
replies
841
views
Subset and Assign MultiAssayExperiment
MultiAssayExperiment
updated 20 months ago by 700 • written 20 months ago by ★ 1.5k
2
votes
1
reply
765
views
Generalised Variant Annotator for GRIDSS2
StructuralVariantAnnotation
updated 2.2 years ago by ▴ 40 • written 2.3 years ago by ★ 1.5k
0
votes
1
reply
1.2k
views
Comment: Comment: Accession ID Conversion and Missing Results
3.0 years ago Dario Strbenac ★ 1.5k
2
votes
3
replies
1.2k
views
Accession ID Conversion and Missing Results
UniProt.ws
updated 3.0 years ago by 66k • written 3.0 years ago by ★ 1.5k
0
votes
0
replies
722
views
Arithmetic Operations Between GRanges' Scores
GenomicRanges
3.1 years ago Dario Strbenac ★ 1.5k
0
votes
0
replies
561
views
plotCopyNumberCallsAsLines Examples have Messy Text Overplotting
CopyNumberPlots
3.1 years ago Dario Strbenac ★ 1.5k
3
votes
2
replies
3.0k
views
Convert DataFrame to data.frame While Keeping Column Name Syntax
S4Vectors
updated 3.2 years ago by 66k • written 3.2 years ago by ★ 1.5k
2
votes
1
reply
999
views
DataFrame or DFrame
S4Vectors
updated 3.2 years ago by 700 • written 3.2 years ago by ★ 1.5k
0
votes
0
replies
1.1k
views
Comment: Comment: MutationalPatterns Signature Database Versions
3.2 years ago Dario Strbenac ★ 1.5k
2
votes
2
replies
1.1k
views
MutationalPatterns Signature Database Versions
MutationalPatterns
3.2 years ago Dario Strbenac ★ 1.5k
3
votes
1
reply
863
views
MultiAssayExperiment sampleMap Requirement for All Assays
MultiAssayExperiment
updated 3.2 years ago by 700 • written 3.2 years ago by ★ 1.5k
0
votes
1
reply
667
views
DegNorm Convergence Statuses
Convergence DegNorm
updated 3.2 years ago by ▴ 90 • written 3.2 years ago by ★ 1.5k
0
votes
0
replies
3.5k
views
Comment: Comment: lpsymphony compilation trouble
3.3 years ago Dario Strbenac ★ 1.5k
0
votes
0
replies
2.0k
views
Comment: Comment: threeUTRsByTranscript per GENE
3.4 years ago Dario Strbenac ★ 1.5k
2
votes
1
reply
3.3k
views
Convert UniProt Entry Names into Gene Symbols
Proteomics ProteomicsWorkflow UniProt.ws
updated 3.5 years ago by 66k • written 3.5 years ago by ★ 1.5k
4
votes
1
reply
1.5k
views
Changing Row Names of MultiAssayExperiment Assay
MultiAssayExperiment
updated 3.7 years ago by ▴ 100 • written 3.8 years ago by ★ 1.5k
0
votes
0
replies
2.5k
views
Comment: Comment: What lengths are used to calculate TPM in "scater" package
3.8 years ago Dario Strbenac ★ 1.5k
0
votes
0
replies
1.4k
views
Comment: C: Obtaining Comments From VCF Header
4.0 years ago Dario Strbenac ★ 1.5k
0
votes
0
replies
786
views
Expected Output for Promoters Used for GRangesList
GenomicRanges
4.0 years ago Dario Strbenac ★ 1.5k
2
votes
4
replies
1.4k
views
Obtaining Comments From VCF Header
VariantAnnotation VCFHeader
written 4.1 years ago by ★ 1.5k
0
votes
0
replies
1.4k
views
Comment: C: Import or Subset VCF PASS Variants
4.3 years ago Dario Strbenac ★ 1.5k
3
votes
2
replies
1.4k
views
Import or Subset VCF PASS Variants
VariantAnnotation subset ScanVcfParam
updated 4.3 years ago by 25k • written 4.3 years ago by ★ 1.5k
275 results • Page 1 of 6
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