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questions
0
votes
6
replies
933
views
HiTC problem exporting to my5C
HiTC
HiC-Pro
4.2 years ago
sergio.espeso-gil
• 0
2
votes
2
replies
1.4k
views
Extracting non-interacting hic reads to create a sam/bam file
diffhic
hicpro
hic
6.8 years ago
sergio.espeso-gil
• 0
1
vote
3
replies
1.5k
views
Subsampling bam file - error DiffBind
diffbind
samtools
updated 7.1 years ago by
Gord Brown
▴ 650 • written 7.1 years ago by
sergio.espeso-gil
• 0
1
vote
2
replies
951
views
Providing specific regions to Diffbind
diffbind
chipseq
updated 7.5 years ago by
Rory Stark
★ 5.2k • written 7.5 years ago by
sergio.espeso-gil
• 0
2
votes
7
replies
1.5k
views
CSAW: GAIN and LOSS of enrichment
csaw
updated 8.2 years ago by
JoannaF
▴ 10 • written 9.1 years ago by
sergio.espeso-gil
• 0
2
votes
3
replies
954
views
CSAW: getBestTest p-value
csaw
updated 8.7 years ago by
Gordon Smyth
50k • written 8.7 years ago by
sergio.espeso-gil
• 0
2
votes
7
replies
1.3k
views
CSAW: Annotation through clustering with external information
csaw
updated 8.7 years ago by
Gordon Smyth
50k • written 8.7 years ago by
sergio.espeso-gil
• 0
0
votes
5
replies
2.3k
views
RUVseq for microRNAs
ruvseq
ruv
microrna
8.8 years ago
sergio.espeso-gil
• 0
1
vote
7
replies
1.2k
views
CSAW: filtering prior information
csaw
8.9 years ago
sergio.espeso-gil
• 0
5
votes
3
replies
2.5k
views
edgeR: annotation and isoform analysis alternatives
edgeR
ruvseq
rnaseq
isoforms
9.0 years ago
sergio.espeso-gil
• 0
1
vote
9
replies
2.6k
views
RUV: removing unwanted variation in RNA-seq
RUV
ruvseq
rnaseq
9.0 years ago
sergio.espeso-gil
• 0
2
votes
6
replies
2.3k
views
SICER and Diffbind
Sicer
diffbind
9.2 years ago • updated 9.1 years ago
sergio.espeso-gil
• 0
3
votes
2
replies
3.5k
views
TMM normalisation method
Csaw
csaw
9.2 years ago
sergio.espeso-gil
• 0
0
votes
2
replies
3.3k
views
Problem loading bamfiles to ChIPQC
ChIPQC
9.3 years ago
sergio.espeso-gil
• 0
0
votes
2
replies
1.2k
views
Diffbind: overlapping + Venn diagram
diffbind
9.5 years ago • updated 9.3 years ago
sergio.espeso-gil
• 0
0
votes
4
replies
1.4k
views
DiffBind: Report differential sites by fold > & < 0
diffbind
updated 9.5 years ago by
Rory Stark
★ 5.2k • written 9.5 years ago by
sergio.espeso-gil
• 0
0
votes
7
replies
2.0k
views
DiffBind:Treatments + second factor
DiffBind
diffbind
updated 9.5 years ago by
Rory Stark
★ 5.2k • written 9.5 years ago by
sergio.espeso-gil
• 0
0
votes
1
reply
794
views
Problem with differential biding sites PCA plot
DiffBind
diffbind
updated 9.5 years ago by
Rory Stark
★ 5.2k • written 9.5 years ago by
sergio.espeso-gil
• 0
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