Bioconductor Ruv

Showing : ruv • reset

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1.0k

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RUV4 RUV Microarray

2.4 years ago Antonio • 0

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1.3k

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RUVSeq RUV RNA-seq

updated 3.0 years ago by James W. MacDonald 63k • written 3.0 years ago by karissa.barthelson ▴ 20

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1.3k

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RUV Nanostring RUV-III

updated 3.4 years ago by hermidalc ▴ 20 • written 4.2 years ago by raf4 ▴ 20

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732

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deseq2 RUV batch highly variable genes

updated 3.6 years ago by tmms • 0 • written 3.6 years ago by f_pardow • 0

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978

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deseq2 ruv batch

updated 4.0 years ago by Michael Love 40k • written 4.0 years ago by r.tom • 0

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719

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missmethyl epic illuminahumanmethylationepicanno.ilm10b4.hg19. ruv

5.1 years ago peter.fransquet • 0

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720

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methylation missmethyl RUV batch effect

5.4 years ago RC • 0

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745

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missmethyl RUV control probes

5.4 years ago Taub, Margaret ▴ 10

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2.2k

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ruv ruvseq ruvnormalize single-cell zero-inflated

updated 6.2 years ago by davide risso ▴ 920 • written 6.2 years ago by Nik Tuzov ▴ 80

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1.9k

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RUV ruvseq ruvr ruvnormalize single cell

6.2 years ago Nik Tuzov ▴ 80

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779

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rnaseq ruv differential gene expression R

6.3 years ago manish20072013 • 0

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2.9k

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RUV single cell batch effect

6.5 years ago ribioinfo ▴ 100

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864

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ruv

6.6 years ago sasha • 0

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2.0k

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ruvseq ruvg ruv

updated 6.7 years ago by davide risso ▴ 920 • written 6.8 years ago by weiwsmiling • 0

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937

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methylation gene expression sva batch effect ruv

6.8 years ago carleshf ▴ 10

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1.3k

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ruvseq RUV ruvnormalize ruvg

7.2 years ago anthonycolombo60 • 0

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2.0k

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ruvseq ruv microrna

8.2 years ago sergio.espeso-gil • 0

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1.4k

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ruv microarray

updated 8.2 years ago by gthm ▴ 30 • written 8.4 years ago by Pauly Lin ▴ 150

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2.4k

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ruvseq ruv

updated 8.4 years ago by davide risso ▴ 920 • written 8.4 years ago by Pauly Lin ▴ 150

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2.2k

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RUV ruvseq rnaseq

8.4 years ago sergio.espeso-gil • 0

20 results • Page 1 of 1

Recent ...

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Answer: tximport error: vroom by Michael Love 40k

Check that they all have same number of lines. I guess one of them was interrupted while writing out and may need to be re-run (Salmon).

Comment: tximport error: vroom by Kevin Blighe 3.8k

Cross-posted: https://www.biostars.org/p/9576578/

Comment: Exporting DESeq2 filtered results by James W. MacDonald 63k

I am interested to know what part of my response you found rude. I asked nicely that you don't add to ancient posts, said your post isn't r…

Comment: Speeding up of DelayedArray::write_block() by Hervé Pagès 16k

> I can imagine writing a sparse high-dimensional array in HDF5, but I'm still not sure how to implement the part where it is read and imme…

Comment: Speeding up of DelayedArray::write_block() by Hervé Pagès 16k

Not in BioC 3.18. At some point (e.g. in 6 months) they will be deprecated, then 6 months later (i.e. in 1 year) they will be defunct, then…

Votes

Comment: Speeding up of DelayedArray::write_block()

Unclear of calculating correlations with case+control samples together

Answer: Error MakeOrgPackagefromNCBI

Batch Effect in DESeq2, how to control, how to remove it, how to address biological question

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