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Comment: Comment: significant difference of p-values with dream() after updating VariancePartition
21 days ago gabriel.hoffman ▴ 110
1
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1
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620
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Answer: Answer: BiocParallel serialization errors on Windows
4 months ago gabriel.hoffman ▴ 110
0
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1
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441
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Issue with weights in voomLmFit()
limma
updated 6 months ago by 50k • written 6 months ago by ▴ 110
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1
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849
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Comment: Comment: How long does it usually take to complete dream() from start to finish?
8 months ago gabriel.hoffman ▴ 110
0
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1
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849
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Comment: Comment: How long does it usually take to complete dream() from start to finish?
8 months ago gabriel.hoffman ▴ 110
0
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1
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849
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Comment: Comment: How long does it usually take to complete dream() from start to finish?
8 months ago gabriel.hoffman ▴ 110
0
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1
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849
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Answer: Answer: How long does it usually take to complete dream() from start to finish?
8 months ago gabriel.hoffman ▴ 110
0
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1
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1.5k
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Answer: Answer: How many parameters should be included in the model design for deseq2?
13 months ago gabriel.hoffman ▴ 110
0
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1
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967
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Comment: Comment: Semi-technical replicates and voom sample weights
14 months ago gabriel.hoffman ▴ 110
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935
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Comment: Comment: Limma: posterior distribution of error variance
17 months ago gabriel.hoffman ▴ 110
0
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5
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935
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Limma: posterior distribution of error variance
limma
18 months ago • updated 17 months ago gabriel.hoffman ▴ 110
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0
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935
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Comment: Comment: Limma: posterior distribution of error variance
18 months ago gabriel.hoffman ▴ 110
0
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1
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1.7k
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Comment: C: How does BiocParallel export variables to threads?
3.9 years ago gabriel.hoffman ▴ 110
7
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4
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1.7k
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How does BiocParallel export variables to threads?
BiocParallel SnowParam parallel
updated 3.9 years ago by 25k • written 3.9 years ago by ▴ 110
1
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1
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2.4k
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Answer: A: dream vignette says limma-voom repeated measures two-group comparison needs two
4.6 years ago gabriel.hoffman ▴ 110
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0
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1.5k
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Answer: A: Results from variancePartition not matching those from lme4
4.6 years ago gabriel.hoffman ▴ 110
0
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0
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1.7k
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Answer: A: Blocking factor in limma/voom vs. variancePartition/dream analysis.
4.6 years ago gabriel.hoffman ▴ 110
2
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1
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1.5k
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Answer: A: Results from variancePartition not matching those from lme4
4.7 years ago gabriel.hoffman ▴ 110
1
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1
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1.5k
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Answer: A: Results from variancePartition not matching those from lme4
4.7 years ago gabriel.hoffman ▴ 110
0
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1
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1.5k
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Comment: C: Results from variancePartition not matching those from lme4
4.7 years ago gabriel.hoffman ▴ 110
0
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0
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2.0k
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Comment: C: BiocParallel: What its the best way to pass large a dataset for parallel process
4.8 years ago gabriel.hoffman ▴ 110
0
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1
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2.0k
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Comment: C: BiocParallel: What its the best way to pass large a dataset for parallel process
4.8 years ago gabriel.hoffman ▴ 110
1
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4
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2.0k
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BiocParallel: What its the best way to pass large a dataset for parallel processing?
bioconductor bplapply bpiterate iterator BiocParallel
updated 4.8 years ago by 25k • written 4.8 years ago by ▴ 110
2
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1
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1.7k
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Answer: A: Blocking factor in limma/voom vs. variancePartition/dream analysis.
4.9 years ago gabriel.hoffman ▴ 110
1
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1
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715
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Bug report for GenomicRanges
genomicranges
updated 5.5 years ago by ★ 11k • written 5.5 years ago by ▴ 110
0
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1
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865
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Gene set enrichment analysis with ChIP-seq data using test statistics directly
limma csaw
updated 5.7 years ago by ★ 28k • written 5.7 years ago by ▴ 110
0
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0
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1.6k
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Answer: A: Making package compatible with old version of R/Bioconductor
7.9 years ago gabriel.hoffman ▴ 110
1
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5
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1.6k
views
Making package compatible with old version of R/Bioconductor
bioconductor R software error biocinstaller
7.9 years ago gabriel.hoffman ▴ 110
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