Biostar Bplapply

Showing : bplapply • reset

vote

replies

999

views

bioconductor bplapply bpiterate iterator BiocParallel

updated 3.1 years ago by Martin Morgan 25k • written 3.1 years ago by gabriel.hoffman ▴ 90

votes

replies

1.4k

views

bplapply progressbar

updated 3.8 years ago by Martin Morgan 25k • written 3.8 years ago by wt215 • 0

vote

replies

870

views

biocparallel bplapply

updated 4.4 years ago by Martin Morgan 25k • written 4.4 years ago by ioannis.vardaxis ▴ 30

votes

replies

1.1k

views

biocparallel bplapply Suse error process

updated 5.7 years ago by jan.winter • 0 • written 5.7 years ago by schweringmarc01 • 0

votes

replies

851

views

bplapply multicoreParam mac os x

5.8 years ago gmerino ▴ 20

votes

replies

711

views

biocparallel bplapply multicore

updated 6.0 years ago by Martin Morgan 25k • written 6.0 years ago by Aaron Lun ★ 27k

votes

replies

2.4k

views

summarizeoverlaps rnaseq bplapply rangedsummarizedexperiment read counting

6.1 years ago ErickF ▴ 40

votes

3.4k

views

bplapply

updated 6.4 years ago by Martin Morgan 25k • written 6.4 years ago by benjamin.phillips22 ▴ 10

votes

replies

3.0k

views

bplapply biocparallel deseq2

updated 7.1 years ago by Valerie Obenchain ★ 6.7k • written 7.1 years ago by Lauren ▴ 40

votes

replies

829

views

biocparallel bplapply

7.3 years ago akaever ▴ 30

10 results • Page 1 of 1

Recent ...

Replies

Comment: Error in Create switchAnalyzeRlist by bpshtiwan ▴ 10

Ok, have you looked cDNA fasta file for Chicken (maternal Broiler) Gallus gallus? I am using Kallisto for alignment and quantification. He…

Comment: DEXseq error unable to find an inherited method for function NSBS for signature by ta_awwad ▴ 10

Hi there, did you manage to solve this problem? thanks TA

Comment: Error in Create switchAnalyzeRlist by k.vitting.seerup ▴ 120

I just double checked and the fasta files found [here][1] should work. Please also take a look at [this][2] if you want to use Ensembl. …

Answer: Correlation between two different datasets: between results of RNAseq and absenc by Michael Love 37k

Re: LFC, if you are working with this and then downstream analysis, I'd recommend `lfcShrink` if you aren't already using this. It will shr…

Answer: Strange Dispersion plot by Michael Love 37k

This indeed looks strange, I would immediately suspect some weird batch effects. Try all kinds of diagnostic plots like, boxplot, PCA, corr…

Votes

DEXseq error unable to find an inherited method for function NSBS for signature CompressedIntegerList

Answer: Error in Create switchAnalyzeRlist

A: DeSeq2 results converting ENSG IDs to Gene Symbols, more than one ENSG ID per Ge

DeSeq2 results converting ENSG IDs to Gene Symbols, more than one ENSG ID per Gene symbol

Awards • All