Bioconductor Bplapply

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bioconductor bplapply bpiterate iterator BiocParallel

updated 4.4 years ago by Martin Morgan 25k • written 4.4 years ago by gabriel.hoffman ▴ 90

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2.1k

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bplapply progressbar

updated 5.1 years ago by Martin Morgan 25k • written 5.1 years ago by wt215 • 0

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1.4k

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biocparallel bplapply

updated 5.7 years ago by Martin Morgan 25k • written 5.7 years ago by ioannis.vardaxis ▴ 30

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1.6k

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biocparallel bplapply Suse error process

updated 7.0 years ago by jan.winter • 0 • written 7.0 years ago by schweringmarc01 • 0

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1.1k

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bplapply multicoreParam mac os x

7.1 years ago gmerino ▴ 20

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959

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biocparallel bplapply multicore

updated 7.3 years ago by Martin Morgan 25k • written 7.3 years ago by Aaron Lun ★ 28k

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2.8k

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summarizeoverlaps rnaseq bplapply rangedsummarizedexperiment read counting

7.4 years ago ErickF ▴ 40

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5.0k

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bplapply

updated 7.7 years ago by Martin Morgan 25k • written 7.7 years ago by benjamin.phillips22 ▴ 10

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3.8k

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bplapply biocparallel deseq2

updated 8.4 years ago by Valerie Obenchain ★ 6.8k • written 8.4 years ago by Lauren ▴ 40

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biocparallel bplapply

8.6 years ago akaever ▴ 30

10 results • Page 1 of 1

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Comment: Why is DMRcate not available for Bioconductor version 3.18? by Daniel E. Weeks ▴ 20

Thank you for the explanation and contacting the DSS package authors.

Comment: Why is DMRcate not available for Bioconductor version 3.18? by shepherl 3.6k

The DSS package authors just need to add `edgeR` to their Suggest of their DESCRIPTION. They have been contacted about it but have not acte…

Answer: GOslim missing GO term by James W. MacDonald 64k

I think it's because that GO term isn't an offspring of any term in the GO slim you are downloading. ``` > ids<- "GO:0002831" > slim <…

Answer: Obtaining rsIDs with ENSG and variant ID information by Robert Castelo ★ 3.0k

You should first and foremost find out what was the human reference genome version from which your dataset was derived. Assuming this was G…

Comment: DESeq2 - groups with biological replicates from the same patient by James W. MacDonald 64k

If by clustering you mean there might be a within-subject correlation, then yes it's a possibility. But you cannot control for that using a…

Votes

Comment: Why is DMRcate not available for Bioconductor version 3.18?

Comment: limma::voom vs edgeR::voomLmFit - when to use?

Answer: limma::voom vs edgeR::voomLmFit - when to use?

Awards • All

Scholar to James W. MacDonald 64k

Scholar to Assa Yeroslaviz ★ 1.5k