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4
votes
5
replies
12k
views
[sva] Error in density.default(x, adjust = adj) : 'x' contains missing values
sva
updated 5 months ago by • 0 • written 7.3 years ago by ▴ 60
0
votes
0
replies
847
views
Comment: Comment: DESeq2 for microbiome data: raw counts or percentages?
14 months ago anton.kratz ▴ 60
0
votes
2
replies
847
views
DESeq2 for microbiome data: raw counts or percentages?
microbiome DESeq2
14 months ago anton.kratz ▴ 60
0
votes
2
replies
915
views
could not find function "get_known_signatures"
MutationalPatterns
updated 2.2 years ago by 6.7k • written 2.2 years ago by ▴ 60
0
votes
1
reply
5.3k
views
Comment: C: No gene set have size > 10 ...
6.3 years ago anton.kratz ▴ 60
2
votes
3
replies
5.3k
views
No gene set have size > 10 ...
clusterprofiler gene ontology
6.3 years ago anton.kratz ▴ 60
0
votes
0
replies
1.5k
views
topGO: how to print GO descriptions only when using showSigOfNodes?
topgo
6.4 years ago anton.kratz ▴ 60
0
votes
0
replies
2.0k
views
Comment: C: Error: could not find function "godata"
6.6 years ago anton.kratz ▴ 60
2
votes
2
replies
2.0k
views
Error: could not find function "godata"
gosemsim
6.6 years ago anton.kratz ▴ 60
0
votes
1
reply
2.7k
views
Comment: C: Error in .checkKeys(value, Lkeys(x), x@ifnotfound) : value for "GO:0000059" not
7.0 years ago anton.kratz ▴ 60
8
votes
5
replies
2.7k
views
Error in .checkKeys(value, Lkeys(x), x@ifnotfound) : value for "GO:0000059" not found
GOSemSim gosemsim gene ontology
updated 7.0 years ago by • 0 • written 7.0 years ago by ▴ 60
0
votes
0
replies
1.2k
views
Comment: C: all pairwise comparisons, some genes can have zero counts everywhere in a given
7.5 years ago anton.kratz ▴ 60
4
votes
2
replies
1.2k
views
all pairwise comparisons, some genes can have zero counts everywhere in a given comparison
deseq2
updated 7.5 years ago by 43k • written 7.5 years ago by ▴ 60
0
votes
0
replies
982
views
Comment: C: is it necessary / recommended to separate samples when doing diff. exp. with DES
7.6 years ago anton.kratz ▴ 60
4
votes
2
replies
982
views
is it necessary / recommended to separate samples when doing diff. exp. with DESeq2?
deseq2
updated 7.6 years ago by 43k • written 7.6 years ago by ▴ 60
4
votes
2
replies
1.3k
views
metagene: paired-end bam as input
metagene
updated 15 months ago by • 0 • written 8.3 years ago by ▴ 60
5
votes
1
reply
1.3k
views
metagene: moving the legend
metagene
updated 8.3 years ago by ▴ 170 • written 8.3 years ago by ▴ 60
3
votes
1
reply
1.3k
views
metagene: strand orientation of plot?
metagene
updated 8.3 years ago by ▴ 170 • written 8.3 years ago by ▴ 60
6
votes
1
reply
2.7k
views
DESeq2, difficulties with multi-factor design
DESeq2 multiple factor design experimental design contrast
updated 9.2 years ago by 43k • written 9.2 years ago by ▴ 60
0
votes
0
replies
6.0k
views
Comment: C: how can I install packages in docker/R/bioconductor so that they persist?
9.2 years ago anton.kratz ▴ 60
4
votes
2
replies
6.0k
views
how can I install packages in docker/R/bioconductor so that they persist?
docker
9.2 years ago anton.kratz ▴ 60
0
votes
0
replies
2.0k
views
Comment: C: no date tag included in docker ps output
9.4 years ago anton.kratz ▴ 60
2
votes
4
replies
2.0k
views
no date tag included in docker ps output
docker reproducibility
9.4 years ago anton.kratz ▴ 60
0
votes
1
reply
2.0k
views
Comment: C: no date tag included in docker ps output
9.4 years ago anton.kratz ▴ 60
0
votes
0
replies
2.8k
views
Comment: C: how can I access my local files (data, R-scripts) from the *docker* R/Bioconduct
9.4 years ago anton.kratz ▴ 60
0
votes
1
reply
3.4k
views
Comment: C: best way to terminate a Docker-based bioconductor/RStudio session?
9.4 years ago anton.kratz ▴ 60
3
votes
3
replies
3.4k
views
best way to terminate a Docker-based bioconductor/RStudio session?
docker
updated 9.4 years ago by ★ 8.2k • written 9.4 years ago by ▴ 60
5
votes
2
replies
2.8k
views
how can I access my local files (data, R-scripts) from the *docker* R/Bioconductor?
docker ubuntu
updated 9.4 years ago by ★ 8.2k • written 9.4 years ago by ▴ 60
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