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0
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475
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Comment: Comment: DESeq2 for microbiome data: raw counts or percentages?
5 months ago anton.kratz ▴ 60
0
votes
2
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475
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DESeq2 for microbiome data: raw counts or percentages?
microbiome DESeq2
5 months ago anton.kratz ▴ 60
0
votes
2
replies
589
views
could not find function "get_known_signatures"
MutationalPatterns
updated 16 months ago by 6.7k • written 16 months ago by ▴ 60
4
votes
3
replies
9.2k
views
[sva] Error in density.default(x, adjust = adj) : 'x' contains missing values
sva
updated 23 months ago by • 0 • written 6.5 years ago by ▴ 60
0
votes
1
reply
4.5k
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Comment: C: No gene set have size > 10 ...
5.5 years ago anton.kratz ▴ 60
2
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3
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4.5k
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No gene set have size > 10 ...
clusterprofiler gene ontology
5.5 years ago anton.kratz ▴ 60
0
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0
replies
1.2k
views
topGO: how to print GO descriptions only when using showSigOfNodes?
topgo
5.6 years ago anton.kratz ▴ 60
0
votes
0
replies
1.7k
views
Comment: C: Error: could not find function "godata"
5.8 years ago anton.kratz ▴ 60
2
votes
2
replies
1.7k
views
Error: could not find function "godata"
gosemsim
5.8 years ago anton.kratz ▴ 60
0
votes
1
reply
2.3k
views
Comment: C: Error in .checkKeys(value, Lkeys(x), x@ifnotfound) : value for "GO:0000059" not
6.2 years ago anton.kratz ▴ 60
8
votes
5
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2.3k
views
Error in .checkKeys(value, Lkeys(x), x@ifnotfound) : value for "GO:0000059" not found
GOSemSim gosemsim gene ontology
updated 6.2 years ago by • 0 • written 6.2 years ago by ▴ 60
0
votes
0
replies
984
views
Comment: C: all pairwise comparisons, some genes can have zero counts everywhere in a given
6.8 years ago anton.kratz ▴ 60
4
votes
2
replies
984
views
all pairwise comparisons, some genes can have zero counts everywhere in a given comparison
deseq2
updated 6.8 years ago by 41k • written 6.8 years ago by ▴ 60
0
votes
0
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801
views
Comment: C: is it necessary / recommended to separate samples when doing diff. exp. with DES
6.8 years ago anton.kratz ▴ 60
4
votes
2
replies
801
views
is it necessary / recommended to separate samples when doing diff. exp. with DESeq2?
deseq2
updated 6.8 years ago by 41k • written 6.8 years ago by ▴ 60
4
votes
2
replies
1.1k
views
metagene: paired-end bam as input
metagene
updated 5 months ago by • 0 • written 7.5 years ago by ▴ 60
5
votes
1
reply
1.1k
views
metagene: moving the legend
metagene
updated 7.5 years ago by ▴ 170 • written 7.5 years ago by ▴ 60
3
votes
1
reply
1.1k
views
metagene: strand orientation of plot?
metagene
updated 7.5 years ago by ▴ 170 • written 7.5 years ago by ▴ 60
6
votes
1
reply
2.5k
views
DESeq2, difficulties with multi-factor design
DESeq2 multiple factor design experimental design contrast
updated 8.4 years ago by 41k • written 8.4 years ago by ▴ 60
0
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0
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5.6k
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Comment: C: how can I install packages in docker/R/bioconductor so that they persist?
8.4 years ago anton.kratz ▴ 60
4
votes
2
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5.6k
views
how can I install packages in docker/R/bioconductor so that they persist?
docker
8.4 years ago anton.kratz ▴ 60
0
votes
0
replies
1.8k
views
Comment: C: no date tag included in docker ps output
8.6 years ago anton.kratz ▴ 60
2
votes
4
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1.8k
views
no date tag included in docker ps output
docker reproducibility
8.6 years ago anton.kratz ▴ 60
0
votes
1
reply
1.8k
views
Comment: C: no date tag included in docker ps output
8.6 years ago anton.kratz ▴ 60
0
votes
0
replies
2.4k
views
Comment: C: how can I access my local files (data, R-scripts) from the *docker* R/Bioconduct
8.6 years ago anton.kratz ▴ 60
0
votes
1
reply
2.9k
views
Comment: C: best way to terminate a Docker-based bioconductor/RStudio session?
8.6 years ago anton.kratz ▴ 60
3
votes
3
replies
2.9k
views
best way to terminate a Docker-based bioconductor/RStudio session?
docker
updated 8.6 years ago by ★ 8.2k • written 8.6 years ago by ▴ 60
5
votes
2
replies
2.4k
views
how can I access my local files (data, R-scripts) from the *docker* R/Bioconductor?
docker ubuntu
updated 8.6 years ago by ★ 8.2k • written 8.6 years ago by ▴ 60
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