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Comment:
Comment: gene set enrichment analysis with enrichKEGG (clusterProfiler) returns very few
3.8 years ago
Emilia
▴ 40
0
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2
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3.1k
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gene set enrichment analysis with enrichKEGG (clusterProfiler) returns very few enriched pathways
clusterProfiler
KEGG
GSEA
3.9 years ago • updated 3.8 years ago
Emilia
▴ 40
0
votes
0
replies
1.9k
views
Comment:
Comment: Plot terms with a NES < 0 GSEA results from gseGO
3.9 years ago
Emilia
▴ 40
0
votes
0
replies
1.4k
views
Comment:
Comment: Can I create a gene set using GAGE?
3.9 years ago
Emilia
▴ 40
1
vote
2
replies
1.4k
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Can I create a gene set using GAGE?
gage
pathview
gageData
written 3.9 years ago by
Emilia
▴ 40
0
votes
0
replies
1.6k
views
Comment:
Comment: Cut down genes displayed on x axis from enrichPlot's heatplot() function
3.9 years ago
Emilia
▴ 40
0
votes
0
replies
7.8k
views
Comment:
Comment: color scale in cnetplot (enrichplot) is not centered in 0, skewed towards positi
3.9 years ago
Emilia
▴ 40
0
votes
1
reply
7.8k
views
Comment:
Comment: color scale in cnetplot (enrichplot) is not centered in 0, skewed towards positi
3.9 years ago
Emilia
▴ 40
0
votes
1
reply
7.8k
views
Comment:
Comment: color scale in cnetplot (enrichplot) is not centered in 0, skewed towards positi
4.0 years ago • updated 3.9 years ago
Emilia
▴ 40
2
votes
6
replies
7.8k
views
color scale in cnetplot (enrichplot) is not centered in 0, skewed towards positive values
enrichplot
clusterProfiler
4.0 years ago • updated 3.9 years ago
Emilia
▴ 40
0
votes
0
replies
1.5k
views
Comment:
Comment: loadTableData function from RCy3 returns "Failed to load data: Provided key colu
4.0 years ago
Emilia
▴ 40
1
vote
1
reply
1.5k
views
Comment:
Comment: loadTableData function from RCy3 returns "Failed to load data: Provided key colu
4.0 years ago
Emilia
▴ 40
2
votes
4
replies
3.8k
views
I want to make a geneList for clusterProfiler analysis but I get "error in do.call( cbind lapply(x is.na )) variable names are limited to 10000 bytes"
clusterProfiler
4.0 years ago
Emilia
▴ 40
1
vote
0
replies
3.8k
views
Comment:
Comment: I want to make a geneList for clusterProfiler analysis but I get "error in do.ca
4.0 years ago
Emilia
▴ 40
0
votes
1
reply
3.8k
views
Comment:
Comment: I want to make a geneList for clusterProfiler analysis but I get "error in do.ca
4.0 years ago
Emilia
▴ 40
1
vote
3
replies
1.5k
views
loadTableData function from RCy3 returns "Failed to load data: Provided key columns do not contain any matches"
Cytoscape
Pathways
Wikipathways
rWikiPathways
RCy3
4.0 years ago
Emilia
▴ 40
5
votes
3
replies
3.0k
views
Gene conversion from SYMBOL to ENTREZ using AnnotationDbi doesn't convert some of the genes
AnnotationDbi
org.Hs.eg.db
4.0 years ago
Emilia
▴ 40
1
vote
0
replies
3.0k
views
Comment:
Comment: Gene conversion from SYMBOL to ENTREZ using AnnotationDbi doesn't convert some o
4.0 years ago
Emilia
▴ 40
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