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Comment:
Comment: gene set enrichment analysis with enrichKEGG (clusterProfiler) returns very few
16 months ago
Emilia
▴ 30
0
votes
2
replies
907
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gene set enrichment analysis with enrichKEGG (clusterProfiler) returns very few enriched pathways
clusterProfiler
KEGG
GSEA
17 months ago • updated 16 months ago
Emilia
▴ 30
0
votes
0
replies
488
views
Comment:
Comment: Plot terms with a NES < 0 GSEA results from gseGO
17 months ago
Emilia
▴ 30
0
votes
0
replies
486
views
Comment:
Comment: Can I create a gene set using GAGE?
17 months ago
Emilia
▴ 30
1
vote
2
replies
486
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Can I create a gene set using GAGE?
gage
pathview
gageData
written 17 months ago by
Emilia
▴ 30
0
votes
0
replies
565
views
Comment:
Comment: Cut down genes displayed on x axis from enrichPlot's heatplot() function
17 months ago
Emilia
▴ 30
0
votes
0
replies
2.5k
views
Comment:
Comment: color scale in cnetplot (enrichplot) is not centered in 0, skewed towards positi
17 months ago
Emilia
▴ 30
0
votes
1
reply
2.5k
views
Comment:
Comment: color scale in cnetplot (enrichplot) is not centered in 0, skewed towards positi
18 months ago
Emilia
▴ 30
0
votes
1
reply
2.5k
views
Comment:
Comment: color scale in cnetplot (enrichplot) is not centered in 0, skewed towards positi
18 months ago • updated 17 months ago
Emilia
▴ 30
2
votes
6
replies
2.5k
views
color scale in cnetplot (enrichplot) is not centered in 0, skewed towards positive values
enrichplot
clusterProfiler
18 months ago • updated 17 months ago
Emilia
▴ 30
0
votes
0
replies
475
views
Comment:
Comment: loadTableData function from RCy3 returns "Failed to load data: Provided key colu
18 months ago
Emilia
▴ 30
1
vote
1
reply
475
views
Comment:
Comment: loadTableData function from RCy3 returns "Failed to load data: Provided key colu
18 months ago
Emilia
▴ 30
2
votes
4
replies
1.2k
views
I want to make a geneList for clusterProfiler analysis but I get "error in do.call( cbind lapply(x is.na )) variable names are limited to 10000 bytes"
clusterProfiler
18 months ago
Emilia
▴ 30
1
vote
0
replies
1.2k
views
Comment:
Comment: I want to make a geneList for clusterProfiler analysis but I get "error in do.ca
18 months ago
Emilia
▴ 30
0
votes
1
reply
1.2k
views
Comment:
Comment: I want to make a geneList for clusterProfiler analysis but I get "error in do.ca
18 months ago
Emilia
▴ 30
1
vote
3
replies
475
views
loadTableData function from RCy3 returns "Failed to load data: Provided key columns do not contain any matches"
Cytoscape
Pathways
Wikipathways
rWikiPathways
RCy3
18 months ago
Emilia
▴ 30
4
votes
3
replies
587
views
Gene conversion from SYMBOL to ENTREZ using AnnotationDbi doesn't convert some of the genes
AnnotationDbi
org.Hs.eg.db
19 months ago
Emilia
▴ 30
1
vote
0
replies
587
views
Comment:
Comment: Gene conversion from SYMBOL to ENTREZ using AnnotationDbi doesn't convert some o
19 months ago
Emilia
▴ 30
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