Biostar Enrichplot

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102

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clusterProfiler enrichplot heatplot

6 weeks ago fatimaruizdelabastida • 0

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148

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enrichplot

updated 8 weeks ago by lida • 0 • written 8 weeks ago by capricygcapricyg • 0

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208

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enrichplot clusterProfiler R

3 months ago Adarsh • 0

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284

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enrichplot

3 months ago Pahi • 0

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232

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R enrichplot

updated 5 months ago by Kevin Blighe 3.4k • written 5 months ago by Neha • 0

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362

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RNASeq clusterProfiler enrichplot

6 months ago jiro.becker • 0

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1.7k

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enrichplot clusterProfiler

13 months ago • updated 12 months ago Emilia ▴ 30

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403

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clusterProfiler GeneSetEnrichment enrichplot

updated 12 months ago by Emilia ▴ 30 • written 13 months ago by saw44 • 0

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220

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enrichplot

17 months ago Francois Marchildon ▴ 20

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298

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enrichplot ReactomePA clusterProfiler similarity coefficients emapplot

20 months ago jan.soderman • 0

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559

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emapplot enrichplot clusterProfiler compareCluster

updated 23 months ago by Guido Hooiveld ★ 3.2k • written 23 months ago by rapmic • 0

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583

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clusterProfiler enrichplot cnetplot

updated 24 months ago by James W. MacDonald 58k • written 24 months ago by anders.tondell ▴ 30

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1.2k

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clusterProfiler enrichplot

2.7 years ago • updated 8 months ago charles.foster ▴ 110

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516

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enrichplot clusterProfiler enrichKEGG gseKEGG

2.9 years ago yurigorelik ▴ 10

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685

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enrichment map emapplot enrichplot enrichMap DOSE

3.6 years ago jan.soderman • 0

15 results • Page 1 of 1

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Comment: Cannot install Phyloseq and dada2 by Guido Hooiveld ★ 3.2k

Did you notice this message:? Installation paths not writeable, unable to update packages path: C:/Program Files/R/R-4.0.0/libra…

Comment: Use of shrunken LFCs to address questions about the distribution of LFCs between by i.sudbery ▴ 20

Thanks Mike. I might have a play with stratifying by expression level. One reason I wasn't looking at gene set testing is that its the nul…

Answer: submitting a BSgenome package by deisianyufg • 0

From my Github repository. I am sorry, I thought the package was already released and realize now that is still only in my github reposito…

Comment: PlotPCA in DESeq2 doesn't produce exactly the same result as prcomp by swbarnes2 ▴ 970

Is the one plot a mirror image of the other?

Answer: Use of shrunken LFCs to address questions about the distribution of LFCs between by Michael Love 35k

hi Ian, Great question, and good to be concerned that the mean expression may be a confounder for either analysis, Why not stratify your…

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Answer: Use of shrunken LFCs to address questions about the distribution of LFCs between

Answer: DiffBind dba.count Error in if (sum(tokeep) < length(tokeep))

Comment: submitting a BSgenome package

Answer: rlog vs vst for outlier identification

Answer: DESeq2 median of ratios normalization for signature score calculation

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