0
votes
5
replies
2.8k
views
DNAString: Standard checksum function?
Biostrings FASTA sequencing
8.2 years ago • updated 3 hours ago Henrik Bengtsson ★ 2.4k
0
votes
29
replies
2.4k
views
How to use bootRanges to bootstrap small RNA loci (nullranges package)
bootRanges nullranges
updated 2 hours ago by 41k • written 15 months ago by • 0
8
votes
7
replies
1.7k
views
SGSeq: moving toward diffex from SGSeq analysis
sgseq rnaseq
updated 12 hours ago by • 0 • written 6.7 years ago by ▴ 80
3
votes
4
replies
417
views
Why does GSEA on edgeR results for randomized samples give highly significant p-values?
fgsea edgeR
updated 30 minutes ago by • 0 • written 3 days ago by ▴ 10
2
votes
3
replies
150
views
Too many significant genes when integrating gtex and tcga
RNA-seq DESeq2
updated 15 hours ago by ★ 4.1k • written 2 days ago by • 0
2
votes
3
replies
93
views
package goseq seems to be not available on the latest version of R
goseq
updated 43 minutes ago by 50k • written 2 days ago by ▴ 20
2
votes
2
replies
72
views
fgsea significant result
fgsea
1 day ago • updated 5 hours ago Chris • 0
1
vote
1
reply
69
views
Handling multiple differential expression comparisons
DESeq2
updated 13 hours ago by 41k • written 2 days ago by ▴ 10
0
votes
0
replies
15
views
Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it does not happen in Linux
GenomAutomorphism
4 hours ago robersy • 0
9 results • Page 1 of 1
Recent ...
Replies
Comment: Why does GSEA on edgeR results for randomized samples give highly significant p- by Chris • 0
Intent to delete when going home. Sorry for that!
Comment: Why does GSEA on edgeR results for randomized samples give highly significant p- by Gordon Smyth 50k
Please ask you own question. Inserting your own dataset into someone else's question like this is very impolite. I have already answered m…
Comment: package goseq seems to be not available on the latest version of R by Gordon Smyth 50k
limma most certainly is available. It installs in R 4.4.0 and Bioc 3.19 for all platforms without any issues. It has not had any period of …
Comment: package goseq seems to be not available on the latest version of R by Patrycja ▴ 20
limma package also isn't available.Is there any information when these packages will be available?
Comment: Why does GSEA on edgeR results for randomized samples give highly significant p- by Chris • 0
Thanks Gordon for the advice!
Votes
Comment: Why does GSEA on edgeR results for randomized samples give highly significant p-
Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-
Handling multiple differential expression comparisons
Answer: fgsea significant result
Answer: fgsea significant result
Awards • All
Scholar to ATpoint ★ 4.1k
Popular Question to Ben ▴ 50
Popular Question to Sam ▴ 10
Popular Question to Gordon Smyth 50k
Popular Question to Zainab ▴ 10
Locations • All
United States, 1 minute ago
France, 18 minutes ago
WEHI, Melbourne, Australia, 27 minutes ago
United States, 48 minutes ago
United States, 50 minutes ago
Traffic: 534 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6