0
votes
2
replies
1.2k
views
Error message when running install script.
Biobase reposTools Biobase reposTools
updated 23.1 years ago by ★ 2.9k • written 23.1 years ago by ▴ 40
0
votes
1
reply
1.0k
views
vsn / rma
Genetics vsn Genetics vsn
updated 23.1 years ago by ★ 13k • written 23.1 years ago by ▴ 30
0
votes
1
reply
851
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o
annotate annotate
updated 23.1 years ago by ★ 2.9k • written 23.1 years ago by ▴ 10
0
votes
1
reply
1.0k
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bioconductor repository
updated 23.1 years ago by ★ 3.9k • written 23.1 years ago by ▴ 40
0
votes
0
replies
1.6k
views
Contribution - Technical Flow Slides
23.1 years ago Sundaram, Shyam NIH/CIT ▴ 110
0
votes
1
reply
998
views
affy batch questions
hgu133a hgu133b hgu133a hgu133b
updated 23.1 years ago by ★ 13k • written 23.1 years ago by ▴ 20
0
votes
3
replies
1.4k
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AnnBuild of u133b?
Annotation AnnBuilder Annotation AnnBuilder
updated 23.1 years ago by ★ 3.9k • written 23.1 years ago by ▴ 80
0
votes
3
replies
1.4k
views
problem with vsn and affy data...
affy vsn affy vsn
updated 23.1 years ago by ★ 1.0k • written 23.1 years ago by ▴ 70
0
votes
1
reply
1.1k
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SVM
updated 23.1 years ago by ▴ 170 • written 23.1 years ago by ▴ 10
0
votes
2
replies
1.3k
views
Bioconductor Install script
Biobase Biobase
updated 23.1 years ago by ★ 2.9k • written 23.1 years ago by ▴ 10
0
votes
0
replies
1.0k
views
Older version of R and affy package
affy affy
23.1 years ago Vawter, Marquis ▴ 70
0
votes
3
replies
1.5k
views
affy image function
affy affy
23.1 years ago Stephen Henderson ★ 1.0k
0
votes
1
reply
1.0k
views
Filtering from Affy
Normalization Normalization
updated 23.1 years ago by ▴ 640 • written 23.1 years ago by ▴ 120
0
votes
1
reply
1.1k
views
mgu74av2
Annotation Cancer mgu74a mgu74av2 annotate Annotation Cancer mgu74a mgu74av2 annotate
updated 23.1 years ago by ★ 2.9k • written 23.1 years ago by ▴ 10
0
votes
3
replies
1.6k
views
CDF file package for the Drosophila Affy chip
cdf affy cdf affy
updated 23.1 years ago by ★ 2.3k • written 23.1 years ago by ▴ 10
0
votes
1
reply
1.3k
views
Swirl Data
updated 23.1 years ago by ▴ 170 • written 23.1 years ago by ▴ 510
0
votes
1
reply
975
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ANN: O'Reilly's 2003 Bioinformatics Technology Conference
23.1 years ago Harry Mangalam ▴ 60
0
votes
1
reply
910
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reposTools update of Affy
reposTools affy reposTools affy
updated 23.1 years ago by ★ 3.9k • written 23.1 years ago by ★ 1.0k
0
votes
4
replies
1.3k
views
hist and mva.pairs problems
affy affy
updated 23.1 years ago by ▴ 640 • written 23.1 years ago by ▴ 70
0
votes
1
reply
1.0k
views
expresso ( medianpolish & pmcorrect="subtractmm") Issue
updated 23.1 years ago by ▴ 640 • written 23.1 years ago by ▴ 110
0
votes
1
reply
1.1k
views
avgdiff in place of avdiff
affy affy
updated 23.1 years ago by ▴ 640 • written 23.1 years ago by ▴ 20
0
votes
1
reply
573
views
Does computeExprSet bug affect rma function?
updated 23.1 years ago by ★ 1.1k • written 23.1 years ago by ▴ 10
0
votes
6
replies
1.7k
views
important bug fix in the package affy
updated 23.1 years ago by ▴ 460 • written 23.1 years ago by ★ 2.3k
0
votes
0
replies
1.1k
views
error message Tcltk
affy affy
23.1 years ago John Zhang ★ 2.9k
0
votes
0
replies
871
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Installing Biocondutor under Debian r
AnnBuilder AnnBuilder
23.1 years ago Johannes Hüsing ▴ 80
0
votes
1
reply
1.7k
views
Job Posting in Biostatistics/Statistics
Bayesian Survival Cancer PROcess ASSET Bayesian Survival Cancer PROcess ASSET
updated 23.1 years ago by ▴ 80 • written 23.1 years ago by ▴ 10
0
votes
2
replies
1.3k
views
Installing Biocondutor under Debian r
updated 23.1 years ago by ▴ 530 • written 23.1 years ago by ▴ 10
0
votes
0
replies
883
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Bug?
affy affy
23.1 years ago Anna Gustafsson ▴ 120
0
votes
0
replies
1.0k
views
BioConductor 1.1 installation problem
Biobase reposTools affy Biobase reposTools affy
23.1 years ago Vawter, Marquis ▴ 70
0
votes
2
replies
1.3k
views
error message Tcltk
affy affy
updated 23.1 years ago by ★ 1.0k • written 23.1 years ago by ▴ 120
0
votes
0
replies
708
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R packages
Microarray Microarray
23.1 years ago Janice Cooke ▴ 10
0
votes
2
replies
1.3k
views
tcltk?
updated 23.1 years ago by ★ 3.9k • written 23.1 years ago by ▴ 120
0
votes
3
replies
1.4k
views
(no subject)
updated 23.1 years ago by ▴ 120 • written 23.2 years ago by ▴ 10
0
votes
1
reply
623
views
URL for BioC PACKAGES is incorrect
updated 23.2 years ago by ★ 3.9k • written 23.2 years ago by ▴ 10
0
votes
1
reply
1.4k
views
Re: Memory management in Windows 2000
Normalization affy graph Normalization affy graph
updated 23.2 years ago by ▴ 360 • written 23.2 years ago by ▴ 250
0
votes
0
replies
821
views
Macintosh Package Bundle
23.2 years ago Jeff Gentry ★ 3.9k
0
votes
0
replies
972
views
XML specifs for R GUIs dialog boxes
graph graph
23.2 years ago Philippe Grosjean ▴ 10
0
votes
6
replies
1.9k
views
memory requirement
updated 23.2 years ago by ▴ 360 • written 23.2 years ago by ▴ 10
0
votes
2
replies
1.2k
views
affy 2.0
affy affy
updated 23.2 years ago by ★ 3.9k • written 23.2 years ago by ▴ 10
0
votes
1
reply
944
views
affy image() mirrored?
affy affy
updated 23.2 years ago by ★ 2.3k • written 23.2 years ago by ▴ 20
0
votes
1
reply
1.2k
views
bg.correct--which is best?
probe affy probe affy
updated 23.2 years ago by ★ 2.3k • written 23.2 years ago by ★ 1.0k
0
votes
2
replies
1.1k
views
hi unable to run annbuilder
AnnBuilder AnnBuilder
updated 23.2 years ago by ★ 2.9k • written 23.2 years ago by ▴ 30
0
votes
3
replies
1.7k
views
affy: CDF packages
cdf cdf
updated 23.2 years ago by ▴ 640 • written 23.2 years ago by ▴ 30
0
votes
1
reply
698
views
output from express log2?
updated 23.2 years ago by ★ 1.1k • written 23.2 years ago by ★ 1.4k
0
votes
4
replies
1.2k
views
affy 1.1 version
affy affy
updated 23.2 years ago by ★ 2.3k • written 23.2 years ago by ▴ 360
0
votes
1
reply
1.5k
views
Affy. memory allocation trouble!
cdf probe trigger cdf probe trigger
updated 23.2 years ago by ★ 5.5k • written 23.2 years ago by ▴ 20
0
votes
1
reply
1.1k
views
affy 1.1 - rma function
probe probe
updated 23.2 years ago by ★ 1.1k • written 23.2 years ago by ▴ 30
0
votes
4
replies
1.1k
views
another error in getBioC()
reposTools reposTools
23.2 years ago Stephen Henderson ★ 1.0k
0
votes
3
replies
1.3k
views
variable "mgu74av2cdf" was not found
cdf probe cdf probe
updated 23.2 years ago by ★ 1.1k • written 23.2 years ago by ★ 1.4k
0
votes
1
reply
833
views
Bioconductor 1.1
updated 23.2 years ago by ★ 3.9k • written 23.2 years ago by ▴ 10
46,723 results • Page 930 of 935
Recent ...
Replies
Comment: Question about the filterByExpr function inputs in edgeR by Gordon Smyth 53k
Regarding edgeR v4 filtering, I didn't mention anything about a minimum count of 10 but rather said "a positive count". So a minimalistic f…
Comment: limpa-blank normalization and Spectronaut's PTM stoichiometry by JKim • 0
Hi Emily, He left some comments regarding normalization. Here is the relevant quote: > The EList object produced by dpcQuant(), containi…
Comment: Joining different datasets and analyzing using the group-specific condition effe by James W. MacDonald 68k
Yes, making a group factor simplifies things, and you will need a new column for disease subject to avoid having a design that is not full …
Comment: Question about the filterByExpr function inputs in edgeR by mohammedtoufiq91 ▴ 10
@gordonsmyth Yes, Gender is more a nuisance factor in our experiment, and our primary interest is to compare groups. I will just use filter…
Comment: Joining different datasets and analyzing using the group-specific condition effe by jason.chai • 0
Thank you very much. I had read that and wondered if I used the recommendation in DESeq vignette, I would lose the pairing between groups? …
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Answer: Question about the filterByExpr function inputs in edgeR
Answer: Question about the filterByExpr function inputs in edgeR
A: DESeq2: What is the unit of DESeq2 normalized read count (VST)? Is it tag per mi
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