Scholar
Created An Answer That Has Been Accepted
Awarded 5089 times (see all awards). Earned by the
following contributors:
1 year, 2 months ago
Germany
Answer: Inconsistent nullp and goseq enrichment results across operating systems
1 year, 2 months ago
United States
Answer: Mapping Between GenBank ID's and Uniprot
1 year, 2 months ago
WEHI, Melbourne, Australia
Answer: Using both voom and removeBatchEffect, will they double adjust the data or is it
1 year, 2 months ago
WEHI, Melbourne, Australia
Answer: Warning message when running limma with covariates
1 year, 3 months ago
United States
Answer: Test of Multiple Linear Combination on coefficients from Wald Test in Deseq2
1 year, 3 months ago
United States
Answer: Create multiple DoparParams with different number of registered cores
1 year, 3 months ago
United States
Answer: DESeq2 returns results for group with just one replicate
1 year, 3 months ago
Australia
Answer: Behaviour of featureCounts when quantifying multi-mapping reads
1 year, 3 months ago
Australia
Answer: Odd behavior of Rsubread::featureCounts when setting `nonOverlap = 0`
1 year, 3 months ago
United States
Answer: Double normalising when using sva and deseq2
1 year, 3 months ago
Barcelona/Universitat Pompeu Fabra
Answer: Interpretation of GSVA with absRanking=TRUE
1 year, 3 months ago
United States
Answer: LRT, pairwise comparisons and p-value adjustment
1 year, 3 months ago
United States
Answer: Slightly different count plots from R and spreadsheet
1 year, 4 months ago
USA, Los Angeles, USC
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
1 year, 4 months ago
WEHI, Melbourne, Australia
Answer: How to correctly adjust for gender in edgeR
1 year, 4 months ago
Barcelona/Universitat Pompeu Fabra
Answer: Method to find pathways different between 2 groups
1 year, 4 months ago
United States
Answer: Help with error using camera() in limma
1 year, 4 months ago
St Louis, MO
Answer: Perform gene set enrichment analysis using fgsea on two conditions that don't ha
1 year, 4 months ago
United States
Answer: Math expression in shapeCustom legend in EnhancedVolcano
1 year, 4 months ago
United States
Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
1 year, 4 months ago
United States
Answer: How to retrieve gene ontology GO class from gene list?
1 year, 4 months ago
United States
Answer: Use of negative binomial model for exponential decay rate estimation using DESeq
1 year, 4 months ago
United States
Answer: DESeq2 - dispersion estimation when there is none
1 year, 5 months ago
WEHI, Melbourne, Australia
Answer: Why p value inconsistent when using different number of pathway score?
1 year, 5 months ago
Germany
Answer: Why p value inconsistent when using different number of pathway score?
1 year, 5 months ago
EMBL Heidelberg
Answer: Error retrieving ensembl gene id using biomaRt...
1 year, 5 months ago
WEHI, Melbourne, Australia
Answer: FilterByExpr low counts with small sample size
1 year, 5 months ago
WEHI, Melbourne, Australia
Answer: Reading huge bismark coverage files using bbseq::read.bismark
1 year, 5 months ago
Switzerland
Answer: ComplexHeatmap: change the names of a HeatmapAnnotation object
1 year, 5 months ago
WEHI, Melbourne, Australia
Answer: Light difference when using coef vs omit a group when compare 3 groups.
1 year, 5 months ago
WEHI, Melbourne, Australia
Answer: Memory errors using read.bismark?
1 year, 5 months ago
Cambridge, UK
Answer: [Diffbind] Blacklist error: Error: Invalid Normalization and Unable to apply Bla
1 year, 5 months ago
United States
Answer: Not fully paired differential gene expression analysis
1 year, 5 months ago
The city by the bay
Answer: Bluster and Varieties of Louvain Clulstering
1 year, 5 months ago
WEHI, Melbourne, Australia
Answer: limma models out of memory issue on Slurm HPC
1 year, 5 months ago
United States
Answer: DESeq2 , filter and theta arguments in resutlts()
1 year, 5 months ago
WEHI, Melbourne, Australia
Answer: Differing results from plotMDS and PCAtools
1 year, 5 months ago
WEHI, Melbourne, Australia
Answer: The difference when using Limma compare between 3 conditions vs 2 conditions
1 year, 5 months ago
Seattle, WA, United States
Answer: From a DNAStringSet to a data.frame
1 year, 5 months ago
Germany
Answer: Existence of Bioconductor versus Seurat Software Ecosystems Quantitative Compari
1 year, 6 months ago
WEHI, Melbourne, Australia
Answer: edgeR, 3 x 2 design with a batch effect and contrasts
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6