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AUCell
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reset
3
votes
1
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169
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Should I set a seed prior to running AUCell?
AUCell
updated 4 months ago by
ATpoint
★ 2.4k • written 4 months ago by
Lucy
▴ 60
1
vote
5
replies
959
views
RcisTarget error with multicore processing
RcisTarget
aucell
SCENIC
updated 4.8 years ago by
Martin Morgan
25k • written 4.8 years ago by
jka8119
▴ 10
2
votes
4
replies
760
views
Cannot install AUCell 1.2.2
AUCell
SCENIC
updated 4.8 years ago by
sara.aibar
▴ 10 • written 4.8 years ago by
Xingyu
• 0
3 results • Page
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Comment: DispEsts plot
by
Michael Love
39k
Are the pairs nested within batch or across?
Comment: KEGG enrichment in R and gene IDs
by
Laia
▴ 10
I managed installing the 3.16 version of BiocManager. R said there were 91 packages to be updated, so I did. However, some warning messages…
Comment: DispEsts plot
by
Sep
• 0
The sample size is 50 for each group, (50 pre and 50 post), samples are paired. No. I have not included the factors to account for unwanted…
Comment: KEGG enrichment in R and gene IDs
by
Guido Hooiveld
★ 3.6k
Do: `BiocManager::install(version = "3.16")`. The packages are (apparently) up-to-date within Bioconductor version 3.15...
Comment: KEGG enrichment in R and gene IDs
by
Laia
▴ 10
Wow thanks. > tools:::.BioC_version_associated_with_R_version() [1] '3.16' > packageVersion("clusterProfiler") [1] '4.4.4' > packageVe…
Votes
Comment: RUVr batch correction doubling number of DEGs
Comment: RUVr batch correction doubling number of DEGs
Answer: RUVr batch correction doubling number of DEGs
A: LogFC: how do you determine the cutoff for differentially expressed genes?
Confused about design for RNA seq experiment
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