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AUcell
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gene Set with high AUC score but no cells assigned to cell type
AUCell
3 months ago • updated 8 weeks ago
gogeni5529
• 0
0
votes
1
reply
610
views
Intepretation of results
AUCell
written 9 months ago by
jasperwong_123
• 0
2
votes
3
replies
2.0k
views
Applicability of AUCell to bulk RNA-seq
AUCell
AUcell
2.5 years ago • updated 2.4 years ago
Lucy
▴ 60
3
votes
1
reply
1.2k
views
Should I set a seed prior to running AUCell?
AUCell
updated 3.2 years ago by
ATpoint
★ 5.0k • written 3.2 years ago by
Lucy
▴ 60
1
vote
5
replies
2.4k
views
RcisTarget error with multicore processing
RcisTarget
aucell
SCENIC
updated 7.6 years ago by
Martin Morgan
25k • written 7.6 years ago by
jka8119
▴ 10
2
votes
4
replies
2.0k
views
Cannot install AUCell 1.2.2
AUCell
SCENIC
updated 7.6 years ago by
sara.aibar
▴ 10 • written 7.6 years ago by
Xingyu
• 0
6 results • Page
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Comment: limpa analysis advice
by
Gordon Smyth
53k
Yes, we use Astral currently. The main dataset in the limpa preprint is Astral. I don't see any major problems with your data and I think …
Comment: limpa analysis advice
by
SamGG
▴ 360
Thank you for your comments. Please note that I did not apply any filtering to the peptide intensity. The experimental protocol includes tw…
Comment: Pairwise comparison of multiple groups with different base
by
ja569116
• 0
Hi @mikelove I have a similar situation, and I feel that I have interpreted the results in the wrong way. In my case I would like to identi…
Comment: Are individual-mouse-based statistics possible in CellChat?
by
TikTsossakaas33ocissalpc
• 0
Questions about comparing groups and statistical significance highlight how data driven thinking matters across fields. In online mobile ga…
Comment: DESeq2 - how many surrogate variables from svaseq, use of lfcshrink
by
ja569116
• 0
Hi @atpoint Thanks for the information. Could you please expand on when to use adjusted p-values vs nominal p-values. My understanding was …
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Comment: limpa analysis advice
Answer: When to use edgeR or limma
Answer: When to use edgeR or limma
Answer: When to use edgeR or limma
Answer: When to use edgeR or limma
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