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Abarray
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ABarray process error for ABI Human Genome Survey V2 data set
Abarray
error
ABI Human Genome Survey V2
6.2 years ago
judemtaylor
• 0
0
votes
1
reply
1.1k
views
AB Rat Genome Survey Microarray
probe
ABarray
probe
ABarray
12.2 years ago
Iain Gallagher
▴ 930
0
votes
1
reply
3.0k
views
2 way anova in Bioconductor
Microarray
GO
genefilter
limma
GeneSpring
ABarray
preprocessCore
arrayQualityMetrics
BRAIN
updated 12.8 years ago by
Guillaume Meurice
▴ 210 • written 12.9 years ago by
Dana.Stanley@csiro.au
▴ 110
0
votes
6
replies
1.9k
views
2 way anova in Bioconductor
GO
genefilter
limma
GeneSpring
ABarray
preprocessCore
arrayQualityMetrics
GO
genefilter
updated 12.9 years ago by
Jenny Drnevich
★ 2.0k • written 12.9 years ago by
Dana.Stanley@csiro.au
▴ 110
0
votes
0
replies
1.0k
views
Bioconductor Digest, Vol 100, Issue 28
GO
TimeCourse
genefilter
timecourse
ABarray
preprocessCore
GeneSelector
GO
TimeCourse
12.9 years ago
Dennis.Burian@faa.gov
▴ 90
0
votes
8
replies
2.4k
views
Import files from Applied Biosystems 7900HT?
ABarray
ABarray
updated 14.1 years ago by
Heidi Dvinge
★ 2.0k • written 14.1 years ago by
Brian Diggs
▴ 30
0
votes
0
replies
811
views
Fwd: Urgent..........Problem in using ABarray
ABarray
ABarray
14.8 years ago
Priyanka Jain
▴ 20
0
votes
0
replies
3.2k
views
Urgent..........Problem in using ABarray
ABarray
ABarray
14.8 years ago
Priyanka Jain
▴ 20
0
votes
11
replies
2.9k
views
Venn Diagram
Cancer
ABarray
Cancer
ABarray
updated 14.9 years ago by
SimonNoël
▴ 450 • written 14.9 years ago by
Hervé Pagès
16k
0
votes
1
reply
1.1k
views
Venn Diagram
ABarray
ABarray
updated 14.9 years ago by
Thomas Hampton
▴ 750 • written 14.9 years ago by
SimonNoël
▴ 450
0
votes
0
replies
919
views
ABarray
ABarray
ABarray
16.5 years ago
Sabah Khalid
▴ 10
0
votes
3
replies
1.3k
views
Problem with ABarray package
ABarray
ABarray
updated 17.3 years ago by
James W. MacDonald
65k • written 17.3 years ago by
Alison Ziesel
▴ 60
12 results • Page
1 of 1
Recent ...
Replies
Comment: Help with running egsea()
by
Chris
• 0
I tried egsea.ma and got this error: gsa = egsea.ma(numeric_matrix, vector_group, probe_annotation, contrasts = contrast_matrix, gs.an…
Comment: Getting Error in hclust(d, method = method): NA/NaN/Inf in foreign function call
by
angelathuynh5
• 0
Thank you for your response. To clarify, the process of making a heatmap performs rowscaling so it takes the value - (mean/std). And to res…
Comment: Method to find pathways different between 2 groups
by
Gordon Smyth
50k
sigPathway is another method that does not account for inter-gene correlation and which gives inflated significance, as we showed in our 20…
Answer: error in limma , contrast.matrix Number of rows of contrast matrix must match nu
by
James W. MacDonald
65k
I doubt you have that many contrasts. I think that is probably the number of rows. What does `dim(fit)` return (and `head(fit$coef)`)?
Answer: Extremely small p-values using Limma for proteomic data
by
James W. MacDonald
65k
If you fit a cell means model (without an intercept), you will have to construct contrasts using `makeContrasts` and fit them using `contra…
Votes
Answer: confused with tximport counts abundance using salmon input
Answer: Getting Error in hclust(d, method = method): NA/NaN/Inf in foreign function call
Answer: error in limma , contrast.matrix Number of rows of contrast matrix must match nu
Answer: Extremely small p-values using Limma for proteomic data
Answer: How to save the DEXSeq results
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Gyan Prakash Mishra
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Gordon Smyth
50k
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to
WouterDeCoster
▴ 130
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Michael Love
42k
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Malcolm Cook
★ 1.6k
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