Bioconductor Abarray

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3.3k

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ABarray ABarray

14.9 years ago Priyanka Jain ▴ 20

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3.0k

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Microarray GO genefilter limma GeneSpring ABarray preprocessCore arrayQualityMetrics BRAIN

updated 12.9 years ago by Guillaume Meurice ▴ 210 • written 12.9 years ago by Dana.Stanley@csiro.au ▴ 110

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3.0k

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Cancer ABarray Cancer ABarray

updated 14.9 years ago by SimonNoël ▴ 450 • written 14.9 years ago by Hervé Pagès 16k

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2.4k

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ABarray ABarray

updated 14.1 years ago by Heidi Dvinge ★ 2.0k • written 14.1 years ago by Brian Diggs ▴ 30

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2.0k

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GO genefilter limma GeneSpring ABarray preprocessCore arrayQualityMetrics GO genefilter

updated 12.9 years ago by Jenny Drnevich ★ 2.0k • written 12.9 years ago by Dana.Stanley@csiro.au ▴ 110

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1.3k

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ABarray ABarray

updated 17.3 years ago by James W. MacDonald 66k • written 17.3 years ago by Alison Ziesel ▴ 60

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1.2k

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probe ABarray probe ABarray

12.3 years ago Iain Gallagher ▴ 930

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1.1k

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ABarray ABarray

updated 14.9 years ago by Thomas Hampton ▴ 750 • written 14.9 years ago by SimonNoël ▴ 450

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1.0k

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GO TimeCourse genefilter timecourse ABarray preprocessCore GeneSelector GO TimeCourse

12.9 years ago Dennis.Burian@faa.gov ▴ 90

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926

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ABarray ABarray

16.6 years ago Sabah Khalid ▴ 10

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899

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Abarray error ABI Human Genome Survey V2

6.3 years ago judemtaylor • 0

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819

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ABarray ABarray

14.9 years ago Priyanka Jain ▴ 20

12 results • Page 1 of 1

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Comment: Cannot install oligo on Fedora by Guido Hooiveld ★ 4.0k

Thanks for all suggestions and getting to the bottom of this! Unfortunately, fixing C code goes way above my skill level, so I cannot contr…

Comment: Cannot install oligo on Fedora by James W. MacDonald 66k

I think the solution is for the C code in `oligo` to be updated to work with more modern versions of `zlib`. The `zlibbioc` package is real…

Comment: Error in gseDO function by Guido Hooiveld ★ 4.0k

I don't fully understand what you are asking... Yet, in my opinion it doesn't make sense to use the results of only 12 genes for ORA (nor G…

Comment: Counter-directional LFC shrinkage by ATpoint ★ 4.2k

Is this RNA-seq? The unshrunken MA-plot looks very odd and indicates that normalization is completely offset.

Answer: ChAMP not available for bioconductor 3.19 by shepherl 3.9k

See https://support.bioconductor.org/p/9158324/#9158336 . We have reached out to goseq to fix the package; we have a community member …

Votes

A: DESeq2: add annotations (from data frame) to DESeqDataSet

Answer: Error in gseDO function

Comment: what the test method for enrichGO in clusterProfiler?

A: Comparison between two different group's pathway analysis results

DiffBind Batch Effect

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