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AnnotationHubData
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3
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8
replies
4.5k
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AnnotationForge::makeOrgPackage GO Ids mistake
AnnotationHubData
AnnotationForge
3.8 years ago
Saber_J
▴ 10
3
votes
3
replies
1.7k
views
I can't run PhyloProfile
AnnotationHubData
PhyloProfile
3.8 years ago
S.t
▴ 10
1
vote
2
replies
1.6k
views
AnnotationHub data for Mus musculus seems to be missing, while previously it was there
tximeta
AnnotationHub
AnnotationHubData
2.3 years ago
Thon
• 0
0
votes
2
replies
1.9k
views
How to fix warning in makeTxDbFromGFF() when using Gencode M30 (mouse)?
GenomicFeatures
AnnotationHubData
tximeta
updated 3.4 years ago by
Michael Love
43k • written 3.4 years ago by
Pratik Mehta
▴ 10
0
votes
13
replies
5.2k
views
EnrichGO not working with db created from annotationhub
clusterProfiler
AnnotationHubData
GO
updated 3.7 years ago by
Guido Hooiveld
★ 4.1k • written 3.7 years ago by
Lucía
▴ 30
0
votes
1
reply
993
views
a BioC/R package that display the genome sequence/ mRNA exons/protein domains
AnnotationHubData
updated 5.2 years ago by
Kevin Blighe
★ 4.0k • written 5.2 years ago by
Bogdan
▴ 670
0
votes
0
replies
796
views
Getting the exon co-ordinates and location
exon
AnnotationHubData
2.8 years ago
mahima.g
• 0
7 results • Page
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Comment: Bulk RNAseq analysis for
by
Mariami
• 0
Thank you so much for your help! will try to proceed with the suggestion
Comment: GSEA in R/Bioconductor course
by
a2a2haa
• 0
Academic researchers often share their breakthroughs and course updates through visual stories, making it essential to have tools that pres…
Comment: Bulk RNAseq analysis for
by
Mariami
• 0
Thank you for the explanation. I understand, although at the moment we are limited in our ability to increase N. My concern came from the o…
Answer: Bulk RNAseq analysis for
by
Gordon Smyth
53k
All three packages allow paired comparisons, where the clone is the "pair". limma moreover allows mixed models (just run `voomLmFit` with `…
Comment: Announcing a New Journal - Bioinformatics Methods and Applications - Now Open fo
by
a2a2haa
• 0
By promoting reproducible analysis, the scientific community can better understand the precise mechanisms that make [Hydrogen inhalation sa…
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Comment: Are transformed values from rlog /vst log2 normalized counts?
Are transformed values from rlog /vst log2 normalized counts?
Answer: Bulk RNAseq analysis for
Answer: DiffBind differential analysis
Answer: Limma-voom sample weights and impact on DEG numbers
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