Showing : BAMBU • reset
2
votes
5
replies
676
views
bambu output
txdb bambu
updated 10 months ago by ▴ 20 • written 10 months ago by • 0
2
votes
2
replies
681
views
BAMBU extended gtf file?
BAMBU bambu
updated 17 months ago by • 0 • written 19 months ago by ▴ 10
1
vote
1
reply
540
views
Bambu data loading issue
BAMBU bambu
updated 19 months ago by ▴ 20 • written 19 months ago by ▴ 10
1
vote
2
replies
551
views
Does BAMBU only takes bam file, not fastq file as input?
BAMBU bambu
19 months ago Seongwoo Han ▴ 10
0
votes
1
reply
551
views
Bambu input file format issue
bambu
updated 17 months ago by ▴ 50 • written 17 months ago by • 0
5 results • Page 1 of 1
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Comment: Math expression in shapeCustom legend in EnhancedVolcano by pl23 • 0
Thank you very much - that worked perfectly! Word of warning to those who try this: it screws up the other legends because of the markdown …
Answer: PCA plot suggestions by Michael Love 41k
For help with interpretation and design of analysis, I recommend working with a local statistician. Due to time restrictions, I can only…
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length by ussarizona ▴ 10
Hi Michael, Yes, I could figure it out what does the error mean. In my matrix I had the first colum GeneID while in my condition I only h…
Answer: Deseq2. decontXcounts not integers. Useful alternative? by Michael Love 41k
Another option would be to put the per sample estimated contamination in the design. This is for example how RUV etc help remove spurious D…
Answer: ATACseq merge peaks by ATpoint ★ 4.0k
That depends on your analysis. Typically, for differential analysis (and convenience) you would produce a single set of peaks (e.g. by merg…
Votes
Answer: Math expression in shapeCustom legend in EnhancedVolcano
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
Comment: Deseq2. decontXcounts not integers. Useful alternative?
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
biomaRt error: database disk image is malformed
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