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Bacteria
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1
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8
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3.2k
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RNA-seq bacterial transcriptome analysis in EdgeR with unusual dispersion trend
RNA-seq
edgeR
estimatedispersions
bacteria
9.3 years ago
Mauve
• 0
3
votes
1
reply
2.1k
views
Tools for GO term enrichment in prokaryotes
bacteria
GO enrichment
updated 8.8 years ago by
Marc Carlson
★ 7.2k • written 8.8 years ago by
ksw
▴ 20
0
votes
1
reply
1.6k
views
Using summarizeOverlaps for bacterial genomes
summarizeoverlaps
bacteria
e coli
unique reads
updated 8.2 years ago by
Valerie Obenchain
★ 6.8k • written 8.2 years ago by
as9309
• 0
3
votes
2
replies
1.4k
views
Job:
Hunting for Human Infectious Agents in Cancer using data from Genomics England's 100,000 genome project : PhD Studentship @ UEA, Norwich
PhD
cancer genomics
bacteria
pathogens
Job
7.2 years ago
Daniel Brewer
▴ 100
2
votes
4
replies
1.4k
views
GO/KEEG enrichment for non-model bacteria - help for beginner
bacteria
GO
KEEG
RNAseq
4.0 years ago
liz.marjory
• 0
0
votes
0
replies
1.2k
views
Job:
postdoc 3yrs bioinformatics bacterial population genomics: Wellington, New Zealand
bacteria
evolution
population
genomics
Job
6.8 years ago
una.ren
• 0
0
votes
1
reply
621
views
Syntenet application to bacterial genome and file processing
syntenet
Bacteria
synteny
updated 4 months ago by
Fabricio Almeida-Silva
▴ 40 • written 6 months ago by
kluongni
• 0
7 results • Page
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Replies
Comment: Can't post a question containing code?
by
NATASHA
• 0
did you find a solution? I´m having the same problem
Comment: error
by
NATASHA
• 0
Please ignore, i didnt copy all the scrip
Comment: Extremely small p-values using Limma for proteomic data
by
James W. MacDonald
65k
If you ever find yourself using the `@` function, you should reconsider what you are doing. There are vanishingly small instances when an e…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
42k
Here is some example code <https://gist.github.com/mikelove/cbbc84634b6854c865cb5eb08ad9b245>
Comment: How to use spike-in information (sequences from another species) with DESeq2::DE
by
maria.soler
• 0
Hi, I have a question barely related to this topic. Do you use a custom reference genome combining your organism and the one used as a spik…
Votes
A: AIC-like measure for DESeq2
Comment: Extremely small p-values using Limma for proteomic data
Comment: Log-cpm values from limma
Comment: Log-cpm values from limma
Comment: deseq2 results
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