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BayesPeak
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874
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[bug] BayesPeak cannot deal with RangedData input
BayesPeak
bug
7.8 years ago
balwierz
▴ 40
1
vote
3
replies
1.1k
views
Error in bayespeak function importing data
bayespeak
8.8 years ago
Reed
▴ 10
8
votes
9
replies
6.2k
views
ChIPseq-style peak calling for paired-end sequencing?
Chipseq
DNAseq
ATAC
bayespeak
narrowpeaks
updated 9.0 years ago by
Gordon Smyth
50k • written 9.0 years ago by
samuel collombet
▴ 140
0
votes
8
replies
2.0k
views
chip-seq data
ChIPSeq
chipseq
BayesPeak
ChIPSeq
chipseq
BayesPeak
11.7 years ago
John linux-user
▴ 210
0
votes
1
reply
1.1k
views
Question about ChIPpeakAnno R package
AnnotationData
annotate
ChIPpeakAnno
BayesPeak
AnnotationData
annotate
ChIPpeakAnno
11.8 years ago
Julie Zhu
★ 4.3k
0
votes
1
reply
964
views
Upgrade bioconductor to version 2.6
BayesPeak
BayesPeak
12.7 years ago
Mary Ellen Fitzpatrick
▴ 20
0
votes
7
replies
1.9k
views
error in bayespeak function
ChIPSeq
GO
BSgenome
BSgenome
chipseq
BayesPeak
ChIPSeq
GO
BSgenome
BSgenome
chipseq
updated 12.9 years ago by
Jonathan Cairns
▴ 130 • written 12.9 years ago by
Andreia Fonseca
▴ 810
0
votes
1
reply
1.0k
views
BayesPeak and RangedData obj output
BayesPeak
BayesPeak
updated 13.5 years ago by
Jonathan Cairns
▴ 130 • written 13.5 years ago by
Binbin Liu
▴ 30
0
votes
4
replies
1.6k
views
BayesPeak segfault woes
BayesPeak
BayesPeak
updated 14.0 years ago by
Jonathan Cairns
▴ 130 • written 14.0 years ago by
Tim Rayner
▴ 270
9 results • Page
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Comment: Using featureCounts with SAF annotation file gives "Error: only GTF files contai
by
ATpoint
★ 4.2k
I was talking about the command line version.
Comment: Using featureCounts with SAF annotation file gives "Error: only GTF files contai
by
atan
• 0
I tried reading in the .csv version of the SAF with header = F and I'm still getting an error. I'm running: ``` counts <- featureCounts( …
Comment: Using the plotting functions of clusterProfiler / enrichplot with enrichment res
by
jovel_juan
▴ 30
enrichPlot requirements are rather low. All what it needs is to provide few columns named specifically. I student of mine wrote the first v…
Comment: Using featureCounts with SAF annotation file gives "Error: only GTF files contai
by
ATpoint
★ 4.2k
SAF files must not have a header.
Comment: Running ENmix with mouse methylation manifest: readidat error - Error in readman
by
xuz
• 0
Could you try the latest version (1.40.1) to see how it works, I am not able to replicate the error message on my computer here.
Votes
Answer: Documenting resources in an `ExperimentHub` package?
Answer: Not able to install any Bioconductor 3.18 package [unable to access index]
Seurat/DESeq2 - single cell RNA-seq differential expression
Seurat to SingleCellExperiment Converting error in MAC
Error when converting Seurat to SingleCellExperiment
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