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News: Reminder: BioC2023 in-person registration closes 19th July!
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16 months ago Maria Doyle ▴ 90
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News: May 31st is the last day to nominate for Bioc2023 Awards!
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18 months ago shepherl 4.1k
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News: Reminder: BioC2023, Awards, TAB Deadline approaching - May 31st!
Bioconductor Community BioC2023
18 months ago Maria Doyle ▴ 90
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News: Last Week to Nominate for Bioc2023 Awards!
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18 months ago shepherl 4.1k
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News: Junior Developer or New Package Developer Award
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News: Bioconductor Community Engagement, Outreach, and Diversity Award
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19 months ago • updated 18 months ago shepherl 4.1k
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News: Bioconductor Long-term Contribution Award
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19 months ago • updated 18 months ago shepherl 4.1k
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News: Nominations for Bioconductor 2023 Awards!
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19 months ago • updated 18 months ago shepherl 4.1k
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News: BioC2023 abstract submission is now open!
presentation BioC2023 Conference community Bioconductor
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News: Seeking members for BioC2023 organizing committee
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22 months ago Maria Doyle ▴ 90
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News: Save the Date Bioc2023!
Bioc2023 Conference Bioconductor
2.0 years ago shepherl 4.1k
11 results • Page 1 of 1
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Comment: Merge Replicates vs Mixed Model by gabriel.hoffman ▴ 160
It is almost always better to retain the full observed data, if the statistical software is able to model the repeated measures. This is a…
Comment: makeContrastsDream for Interaction by gabriel.hoffman ▴ 160
The simplest way to handle contrasts with an interaction term is to create a new variable. Lets consider a simpler case with variables `Se…
Answer: DESeq2 sizefactors counfounded with biological treatment by James W. MacDonald 67k
Your question is off-topic for this site, which is primarily intended to help people with technical issues with Bioconductor packages rathe…
Comment: Epic v2 Annotation CpG_maf source? by Meghan • 0
Thank you, so much, for this reply!
Comment: txdb.mmusculus.ucsc.mm10.knowngene issue on X chromosome by remi-xavier.coux ▴ 10
That indeed worked, thanks a lot for the help (and for karyoploteR)
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Comment: txdb.mmusculus.ucsc.mm10.knowngene issue on X chromosome
Answer: Epic v2 Annotation CpG_maf source?
Answer: bioconductor packages on bioconda
Filtering low variance genes for WGCNA
A: Filtering low variance genes for WGCNA
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